Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1152 ATGGCATCCACATTTGTCACTTTGCCAACCCCCTTCCTACACAGAACCACTTCATTCTCTTCCTCCAACAACACATTCCCAGTTTTGAAAAGGCACTCTTTCAAAGTCAATGCACTAGTTTCCAACAAATGGGAACCAACTAAGGTTGTGCCTCAGGCTGATAGAGTCCTTATTCGTTTGGAGGCACTACCAGATAAAACTGCTGGTGGAGTTTTGTTGCCCAAGTCCGCTGTTAAATTCGAGCGATATCTGATGGGAGAAATCCTCTCTGTTGGTGCTGAGGCAGGAGAAGAAGTAAAAGCTGGATCAAAGGTTTTGTTTACTGACATGAATGCTTATGAGGTTGATTTGGGGACTGACGAAAAGCACTGCTTCTGTAAAGCAAGCGACCTGTTGGCCGTGGTTGAGTAG 411 0.4526 MASTFVTLPTPFLHRTTSFSSSNNTFPVLKRHSFKVNALVSNKWEPTKVVPQADRVLIRLEALPDKTAGGVLLPKSAVKFERYLMGEILSVGAEAGEEVKAGSKVLFTDMNAYEVDLGTDEKHCFCKASDLLAVVE* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1152 136 Pfam Chaperonin 10 Kd subunit 48 135 IPR020818 GO:0005524|GO:0006457|GO:0140662
Amo19g1152 136 Gene3D GroES chaperonin 44 136 IPR037124 GO:0006457
Amo19g1152 136 CDD cpn10 48 135 IPR020818 GO:0005524|GO:0006457|GO:0140662
Amo19g1152 136 PANTHER 10 KDA HEAT SHOCK PROTEIN 13 135 IPR020818 GO:0005524|GO:0006457|GO:0140662
Amo19g1152 136 PANTHER 10 KDA CHAPERONIN 1, CHLOROPLASTIC-RELATED 13 135 - -
Amo19g1152 136 SMART Cpn10_2 48 135 IPR020818 GO:0005524|GO:0006457|GO:0140662
Amo19g1152 136 SUPERFAMILY GroES-like 48 136 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1152 Amo-Chr19 21939640 21944111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1152 30 136 Calmodulin-binding Proteins AT5G20720 28.947 1.80e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1152 K04078 - gmx:100306026 205.297