Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1149 ATGCCATTAGTATTGCCTCATAAGATAAAAGATAATCGAAACTCACAGACAAAAGATGTATCAATTAATTTAGCGAGATCACTTTATAAGGCTGGGAATGCTGTTGATGCTATACAGGAATGTGAAAATTTGAGGAAAGAAGGAATGCTTGACTTCGAAATTTTTCAAGTATATGCAATCTCGTTGTGGCAACTTGGTAAAAATGATTTAGCACTCTCAATAGTCAGAAGTCTTGCAGCAAGTGTTTCTTCTATGGAAAAGACAGCCATTAAGATCTCCATTAGTTTCATCTTTAGATTATTATACTACATCAGTGGACTAGATGCAGTCATAACCAACATTATGAAAATGCCAAAGGAGCTTATTCAAAGTTCAAAAGTTAATTTTGTTATGTCTGTTGTCGATGCTCTTGATGGACACAATCGTCTTGGATTTCTTGTCTCAAGTAACCTATATTTTCTCAAAGATCATGATGAAATTGCCAGGGTGCACTTTTTAATAGCACTTGGTAAACTGGTGAAAAATGGGCATGATGGCTTCCTTGCAGTTCAGAGTGGAATTGCTTACCTCAGAAGGATTCTGCACATCTTCCCTAACTGTAGTTTGATAAGGAACCTTGTTGGCTATCTCTCACTATCTGGTAAAGAGTCGAACAGTTGCCATCTGGCTATAAGGTGTTGTAAACTGGACCATCTTGACCTTTCTGATAAAGAAGGTTTAAAATCAGCTTCTGATATTCATGGTATTGCAGTAGTTGCCTGCTATGCCAATGGGAACAGTAACCCAAATCTTAAAGAACCTTTGCCATGGTCTACCCGGATTCAAATAGCTCTGGATTCAGCCAGGGGACTTGAATATATTCATGAACATACAAAGCCTGTATATATCCATCGCGATATAAAGTCGGCAAACATATTATTAGAAAAATCCTTCCATGGAAAGGTTGCGGATTTTGGACTAAGCAAAGCTGATTGA 975 0.3754 MPLVLPHKIKDNRNSQTKDVSINLARSLYKAGNAVDAIQECENLRKEGMLDFEIFQVYAISLWQLGKNDLALSIVRSLAASVSSMEKTAIKISISFIFRLLYYISGLDAVITNIMKMPKELIQSSKVNFVMSVVDALDGHNRLGFLVSSNLYFLKDHDEIARVHFLIALGKLVKNGHDGFLAVQSGIAYLRRILHIFPNCSLIRNLVGYLSLSGKESNSCHLAIRCCKLDHLDLSDKEGLKSASDIHGIAVVACYANGNSNPNLKEPLPWSTRIQIALDSARGLEYIHEHTKPVYIHRDIKSANILLEKSFHGKVADFGLSKAD* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1149 324 Gene3D Transferase(Phosphotransferase) domain 1 235 324 - -
Amo19g1149 324 ProSiteProfiles Protein kinase domain profile. 72 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g1149 324 PANTHER SUPERKILLER 3 PROTEIN-RELATED 11 267 IPR039226 GO:0006401|GO:0055087
Amo19g1149 324 Pfam Protein tyrosine and serine/threonine kinase 264 322 IPR001245 GO:0004672|GO:0006468
Amo19g1149 324 SUPERFAMILY Protein kinase-like (PK-like) 265 322 IPR011009 -
Amo19g1149 324 ProSitePatterns Serine/Threonine protein kinases active-site signature. 295 307 IPR008271 GO:0004672|GO:0006468
Amo19g1149 324 Gene3D Tetratricopeptide repeat domain 6 88 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1149 Amo-Chr19 21802216 21804121 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1149 257 322 Receptor kinase-like Gene Family AT3G21630 70.000 1.21e-26 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Amo19g1149 PK_Tyr_Ser-Thr 7.2e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1149 K12600 - adu:110275005 397.512