Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1138 ATGGACGACGACGATGAGATCCAGTCACATCCGTCTCCGGCGAGCGGATCCCCGGCATCGTCGCCGAGGGAGAACGGCCGGATAACGGTGACGGTGGCGGCGCCGGCACCGCAGCAGCATCCGCCTCCGGCTCCTAATAGCGTGGCATTAGCGCTTCCGATTCAGCAGCAGCCAGCGCCTCCCCCGAGGGGAAACGGCGGCGGTAGCGGGGGAGGAGGAGGAGGAGGGAGGGAAGATTGCTGGAGCGAGGGCGCTACGGCGGTGCTGATTGACGCGTGGGGAGAGAGGTACCTTGAACTGAGCAGGGGGAACCTGAAACAGAAACACTGGAAGGAGGTAGCGGAGATCGTGAGCGGAAGAGAGGACTACGGCAAGACACCAAAGACCGACATACAGTGCAAGAACCGGATCGACACCGTCAAGAAGAAGTACAAGCTCGAGAAGGCAAAGATCGCCGCCGCCGGCGTACCTAGCAAGTGGCCTTTCTATGATCGCCTTGACCAGCTGATCGGTCCCACTGCCAAGATCCCCGGCGCCGGTAACTCCCCCTCCCCGGCCACACAGAAGGTTCCGCTTGGAATTCCGGTAGGGATCCGCAGCAGCGGTAATAACAATAATCAGTTCCAAACTCTAAAGAATCAAAATCAGAACCAAAACAAGCAGGTGAAGAACCAGAAGCTCTCGTTCCGGAGGCGTCATCCTACTCATCCAGAGTCTGATTCCTCGGATAGAGACCCACCGTCTCCGGTGTCCAGTGACAGTTTCCCGCCGGAGAATTATGAGCGGAAGAGGCCGAGGATGCAGCAGCAGAGAGAGATGGATATGAACCCAAACGGGCCTAAAGGAAGGGAACCGGTACTAGTGACGAAGGCGAAGGGGAAGAGCTGGGGGTGTGCAGTGAGGGAATTGACTCAGGCAATTCTCAAGTTTGGGGAGGCTTACGAGCAAGCGGAGAGTTCGAAGCTTCAGCAGGTGGTGGAGATGGAGAAGCAGAGGATGAAATTCGCCAAGGATCTTGAGCTGCAGCGGATGCAGTTCTTCATGAAGACACAGTTGGAGATCTCGCAACTTAAGCTTGGTAAAAAAGGTACCAACAACAATGCAGGGAATCACCATAGCAGCAACACCAACAACCACCATAACAATAATAGTGACAGTGAGTGA 1164 0.5619 MDDDDEIQSHPSPASGSPASSPRENGRITVTVAAPAPQQHPPPAPNSVALALPIQQQPAPPPRGNGGGSGGGGGGGREDCWSEGATAVLIDAWGERYLELSRGNLKQKHWKEVAEIVSGREDYGKTPKTDIQCKNRIDTVKKKYKLEKAKIAAAGVPSKWPFYDRLDQLIGPTAKIPGAGNSPSPATQKVPLGIPVGIRSSGNNNNQFQTLKNQNQNQNKQVKNQKLSFRRRHPTHPESDSSDRDPPSPVSSDSFPPENYERKRPRMQQQREMDMNPNGPKGREPVLVTKAKGKSWGCAVRELTQAILKFGEAYEQAESSKLQQVVEMEKQRMKFAKDLELQRMQFFMKTQLEISQLKLGKKGTNNNAGNHHSSNTNNHHNNNSDSE* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1138 387 MobiDBLite consensus disorder prediction 172 285 - -
Amo19g1138 387 Coils Coil 205 228 - -
Amo19g1138 387 MobiDBLite consensus disorder prediction 358 387 - -
Amo19g1138 387 MobiDBLite consensus disorder prediction 10 27 - -
Amo19g1138 387 MobiDBLite consensus disorder prediction 1 80 - -
Amo19g1138 387 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 2 358 - -
Amo19g1138 387 MobiDBLite consensus disorder prediction 198 224 - -
Amo19g1138 387 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 2 358 IPR044823 -
Amo19g1138 387 Gene3D - 81 146 - -
Amo19g1138 387 Pfam Myb/SANT-like DNA-binding domain 78 169 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1138 Amo-Chr19 21498777 21500687 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1138 1 373 Trihelix Transcription Factor Family AT3G14180 46.035 4.22e-99 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Amo19g1138 Myb_DNA-bind_4 1.5e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1138 - - adu:107464875 608.216