Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1100 AGCTCATTGAAACAAAAACCACAAAACCCAAATATGGCTATAGATTTGTTATCCCCTGGCTTAATTCCAACCATAGCAACAATATTAACCACTTTCGTGGTCGTCGACATCCTCCTGCGCCATATTCGTGGCCGCCGGTATAATCTGCCACCAGGCCCAAAACCATGGCCCATCATAGGTAACCTAAACCTCATTGGATCCCTTCCTCACCGGTCCATCGACGATCTCAGCAAAAAATATGGGCCCATCATGCATCTCTGGTTCGGCTCCCACCCTGTAGTTGTGGGTTCATCCGTAGAGATGGTAAGATCTTTCCTCAAAACCCATGATGCCGCCATAGCCGGCCGACCCAAATTCTCCGCTGGAAAATACACAACCTACAATTATTCCAACGTATTATGGTCCCAGTACGGCCCATACTGGCGGCAAGCGCGAAGAATGTGCGTAATGGAGCTCTTCAGCGCAAAACGCCTCGAGTCATATGAATACATAAGAAAAGAAGAGATGCGCAATCTGTTGAGTGATCTTGCCAACTCTACTAACACAACGTTGTTGTTGAAGGACCATCTTTCAACAATGAGCCTCAATGTCATAAGTCGCATGGTGTTTGGGAAGAAATACTTGGACAAATCGGAGAACGCGATTATATCCCCGCATGAATTCAACAAGATGCTAGAGGAGTTGTTCTTAATGAACGGTGTACTTAACATAGGGGACTTCATCCCCTGGGTTAACTTCTTGGATTTGCAGGGATACATAAAAAGGATGAAGGCTGTGGCTAAGAAGTTTGATAGGTTTATGGAGCATGTGTTGGATGAACACATGGAGAGGAGGATAGCCGTAAAGGATTATGTTGTTAAGGACATGGTAGATGTGCTTTTGGAGCTTGCAGAGGATCCTAATCTTGAGGTCAAATTTGAGAGGCATGAGATCAAAGCATTCAGTCAGGATTTAATAGCCGGTGGAACGGAGAGCACTACAGTTACTATAGAATGGGCAATCTCGGAGATATTGAACAAGCCAGAGATTTTCAAGAAAGCAACAGAAGAGCTAGACAGAGTAATAGGAAGAGAGCGATGGGTTGAAGAGAAAGACATTGTTAATTTACCTTACATTAACGCCATCGTTAAGGAGGCAATGAGGCTACACCCTGTGGCACCAATGTTGGYGCCACGGCAAGCCCGCGAAGATATTAAGATCGACGAATACGATATCCCGAAAGGGACACAAGTGCTAATCCATATTTGGACCGTTGGCCGAGACCCCAAGATATGGGACAACCCAACTGAGTTTCAACCGGAGCGATTTCTTGGTAAGAATATTGATGTGAGAGGCCATGACTACGAGTTGTTGCCGTTTGGTGCTGGTAGAAGAATGTGCCCGGGTYATCCTCTTGGACTCAAGGTGATTCAATCAAGTTTGGCTAATTTGTTGCATGGCTTTAATTGGAGACTACCTGACAATATGAAGAAAGAAGACTTGAATATGGAGGAAATTTTTGGGCTTTCAACCCCAAAGAAATATCCTCTTGAAGTGGTCATTGAGGCTAGACTTCCTAGCCATCTTTATTCCATCTGA 1578 0.448 SSLKQKPQNPNMAIDLLSPGLIPTIATILTTFVVVDILLRHIRGRRYNLPPGPKPWPIIGNLNLIGSLPHRSIDDLSKKYGPIMHLWFGSHPVVVGSSVEMVRSFLKTHDAAIAGRPKFSAGKYTTYNYSNVLWSQYGPYWRQARRMCVMELFSAKRLESYEYIRKEEMRNLLSDLANSTNTTLLLKDHLSTMSLNVISRMVFGKKYLDKSENAIISPHEFNKMLEELFLMNGVLNIGDFIPWVNFLDLQGYIKRMKAVAKKFDRFMEHVLDEHMERRIAVKDYVVKDMVDVLLELAEDPNLEVKFERHEIKAFSQDLIAGGTESTTVTIEWAISEILNKPEIFKKATEELDRVIGRERWVEEKDIVNLPYINAIVKEAMRLHPVAPMLXPRQAREDIKIDEYDIPKGTQVLIHIWTVGRDPKIWDNPTEFQPERFLGKNIDVRGHDYELLPFGAGRRMCPGXPLGLKVIQSSLANLLHGFNWRLPDNMKKEDLNMEEIFGLSTPKKYPLEVVIEARLPSHLYSI* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1100 525 Coils Coil 525 525 - -
Amo19g1100 525 SUPERFAMILY Cytochrome P450 50 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g1100 525 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g1100 525 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g1100 525 PRINTS E-class P450 group I signature 77 96 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g1100 525 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g1100 525 PRINTS E-class P450 group I signature 101 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g1100 525 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g1100 525 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g1100 525 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g1100 525 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g1100 525 Pfam Cytochrome P450 50 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g1100 525 Gene3D Cytochrome P450 42 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g1100 525 PANTHER CYTOCHROME P450 71A1-LIKE 26 516 - -
Amo19g1100 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Amo19g1100 525 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g1100 525 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g1100 525 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g1100 525 PANTHER STEROID 21-HYDROXYLASE-RELATED 26 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1100 Amo-Chr19 19971624 19974881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1100 25 525 Cytochrome P450 AT5G07990 39.729 3.34e-133 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1100 K20623 - gmx:100790480 844.343