Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1086 ATGTACGGATCCAGAGCCGGAGCTATAGCCGGAACCACCGAAAGGATGGAAGGAACTGCCAAAGAAGAACGCAACGATGTGCCCTCAATTTCGAAGCCAGTTAAGGCAAACACTACGAAGGCTGAGAGACGAGCCTTGCAGGAGGCACAAAGAGCTGCAAAAGCTACTTCTAAAGCTGATGGCAGAGCAGAACCTGGTAAAGGTGTGAAGCAGTCTTCCGGGAAGAAAGATGGACCTCCTGTAACATCTTCGACAGCTRCTGACAAGAAATCAGGTGGTCGTTCTTKGGAGAAAGAGAGGAAAAAAGATGTTCCTCCTCCACGTATGCAATTTGACGACAAAAGTAGAGTTGAAAAGGCCAAAAGGCGTGCATTAGTCAATCAAACTGAAGCTGTAAACAGAGTTGAATTATTTCGTCATTTGCCTCAATACGAATATGGTTCTCAGCTTCCTAAGCTTGAATCAAAGCTTTTCCAAATTGATTCAGTGCATCCTTCTGTGTTCAAGGTTGGATTGCGTTACTTGGCAGGAGGTACATCTGGTGATAATGCTCGTTGTATTGAAATGCTCAGAGCCTTTCAAGAAGCAATCAGAGACTACTCTACTCCTCCTGAAAAAGCTCTTGTTAGGGACTTAACTGCAAAAATTGGTAGTTATGTTTCATTTTTCACTGAATGCAGGCCTCTTTCTATTAGCATGGGAAATGCAATTAGATTTGTAAAGAGTCGTATTGCCAAGTTGCCTTTAAGTCATTCTGAATCTGAGGCAAAAGCAACTCTTTATTCTGATATTGATCGATTCATAAATGAGAAAATAATTCTTGCTGCTAAGGTGATAGTTGGACATGCTGCTACAAAGGTTAGGGATGGAGATGTTCTTCTAATATATGGATCATCATCTGTTGTGGAGATGATTCTTTTATATGCTCATGAGCTTGGGAAACAGTTCCGTGTTGTGGTGGTAGATTCGCGACCAAAGCTTCAAAGTCAGGCCTTAATCCGTAGGTTGTTGGCAAAGGGAGTCGATTGTACATATACTCTAATAAATGGTGTTTCTTATGTCATGCATGAAGTCACACGAGTTTTTCTGGGAGCTTCTGCTGTTCTATCTAATGGAACTGTATATTCAAGAATTGGGACTGCATGTGTTGCTATGGTGGCTCATGCATTTCATGTTCCTGTATTGGTCTGTTGTGAAGCTTATAAGTTTCACGAAAGAGTCCAACTTGATTCAATATGTTCCAATGAACTAGGTGATCCCAATGCTGTTGCCACGGTTCCTGGAAGAATGAATGTAAATTATCTAGACAATTGGACCAGTGAAGACAATTTGCAGATTTTGAATTTGATGTTTGATGTCACTCCTTCAGATTATATCTCAGCAATTGTTACAGACCATGGAATGGTCCCTCCGACAAGTGTGCCCGTAATTGTACGCGAATACGGTCGAGAGCACTTGATTTAG 1464 0.4167 MYGSRAGAIAGTTERMEGTAKEERNDVPSISKPVKANTTKAERRALQEAQRAAKATSKADGRAEPGKGVKQSSGKKDGPPVTSSTAXDKKSGGRSXEKERKKDVPPPRMQFDDKSRVEKAKRRALVNQTEAVNRVELFRHLPQYEYGSQLPKLESKLFQIDSVHPSVFKVGLRYLAGGTSGDNARCIEMLRAFQEAIRDYSTPPEKALVRDLTAKIGSYVSFFTECRPLSISMGNAIRFVKSRIAKLPLSHSESEAKATLYSDIDRFINEKIILAAKVIVGHAATKVRDGDVLLIYGSSSVVEMILLYAHELGKQFRVVVVDSRPKLQSQALIRRLLAKGVDCTYTLINGVSYVMHEVTRVFLGASAVLSNGTVYSRIGTACVAMVAHAFHVPVLVCCEAYKFHERVQLDSICSNELGDPNAVATVPGRMNVNYLDNWTSEDNLQILNLMFDVTPSDYISAIVTDHGMVPPTSVPVIVREYGREHLI* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1086 487 MobiDBLite consensus disorder prediction 1 120 - -
Amo19g1086 487 MobiDBLite consensus disorder prediction 37 71 - -
Amo19g1086 487 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 13 486 - -
Amo19g1086 487 MobiDBLite consensus disorder prediction 91 120 - -
Amo19g1086 487 SUPERFAMILY NagB/RpiA/CoA transferase-like 178 481 IPR037171 -
Amo19g1086 487 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 13 486 - -
Amo19g1086 487 Pfam Initiation factor 2 subunit family 180 471 IPR000649 GO:0044237
Amo19g1086 487 Gene3D - 275 481 IPR042529 -
Amo19g1086 487 MobiDBLite consensus disorder prediction 76 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1086 Amo-Chr19 19731127 19736584 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1086 32 487 Eukaryotic Initiation Factors Gene Family AT5G38640 70.213 0.0 673
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1086 K03680 - gmx:100778711 743.036