Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1083 ATGGCTGTGACAGGAGAACAAGGGCACAAATACGGGGAAGGATTTGCCGTGGACCATTCCTGGGAGTTGGGTACAATGGGTATATCAAACGCCAACTACAATTCCATTCTACACATCAACGGTGATTTTCAAGAGGTCAAGGATTTTCGAAAGAGTGTCATAATGTCAGGTGTACCTGCTGCAACTCAAGTTTTCCAAATACTGGGAGAACCGACGCATTCAATTGAAGAGGACCTACTTAACCATTTCATTTATAAGCCCATATCCGAGCTGAAGGATTCAATTGAGTGGTACAAGAGTTGCAAGCATTGCTTCCATTCTTTACAAGAAGCTGAGAACTCATACCACTGTGCTAGGTGTGAGACATACCCATCGTCTCACACCCCAAGGTTTAGCATAAAGATGCAAGTTGCTGAGGAGACTGATACGACTTCCTTCCTACTGTACGATAAGGAAGCGTCCAAATTCCTTGGTATATCTGCATCCGATCTCAGACTTGCACAACTAACCAGGGGTGGAGTTAACAAGGAATATCCAACAGAGCTTAACTCACTGATGGGAAAGAAATTTCTGTTCAAAGTATCTGTGAAAATGGAAGATCTTAATGCATTCCAACCATGTAGGATAATTGTTACTAAGCTCTGTGCGGACAACTCCGTTATCACAAAATTTACTGCGAAGACTAGCTTTGACGAGCACAATATGGGTATGGAGAACTCTGAACTGCTGAGCATGAACACTGACTCTGCTGAGACCCCAAAGGGTACAACCTCTCCCTCTGTTGAGACTTTATCCCAGGGAACAAATGATGGATTCTCAACTCCAAATGATAAAATTATCACTGGTGGGTGGTCTAAGAAGCTGATCAAACTGTACCCAGATTCTGGCCATGCATCATTCTCCAAGAAAGTGACAAAGGGTGTCACTAAAACCATTGTTGAGATTCATGATGATTAG 957 0.4305 MAVTGEQGHKYGEGFAVDHSWELGTMGISNANYNSILHINGDFQEVKDFRKSVIMSGVPAATQVFQILGEPTHSIEEDLLNHFIYKPISELKDSIEWYKSCKHCFHSLQEAENSYHCARCETYPSSHTPRFSIKMQVAEETDTTSFLLYDKEASKFLGISASDLRLAQLTRGGVNKEYPTELNSLMGKKFLFKVSVKMEDLNAFQPCRIIVTKLCADNSVITKFTAKTSFDEHNMGMENSELLSMNTDSAETPKGTTSPSVETLSQGTNDGFSTPNDKIITGGWSKKLIKLYPDSGHASFSKKVTKGVTKTIVEIHDD* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1083 318 MobiDBLite consensus disorder prediction 247 276 - -
Amo19g1083 318 SUPERFAMILY Nucleic acid-binding proteins 88 216 IPR012340 -
Amo19g1083 318 Pfam Replication factor-A C terminal domain 88 213 IPR013955 -
Amo19g1083 318 CDD RPA1_DBD_C 88 202 IPR013955 -
Amo19g1083 318 Gene3D - 76 223 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1083 Amo-Chr19 19675668 19677368 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1083 93 211 Core DNA Replication Machinery Family AT5G08020 30.833 7.38e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1083 - - ahf:112707100 377.096