Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1073 ATGGAGTCGCCGGAAACATTACCGTTTGAGACGGCGGAGAAGATCATCCTCCGGTGGGACTCGACTGCGTCGGAGGAAGCAAGGGAGAAGATGATCTTCGACGGTGACCGCCAGGAGGTGGATCGTTACCTCCAGGCCGTGGATGAAATCCAACGGTCCATGTCCTCCGCCTCTATCTCCGACGACCCGAAGGTCAACTGTGCCCTCCAGATCGCTATGGCTCGCCTGGAGGACGAGTTCCGCAACATCCTCATCTCCCACACCAACCCCATCGAAGCCGATTCACTCATAGACCCCACTTCCCTCCATTTTACCACCCCAGAAGACGAAGAAGACCATGACCAACAACAACAACAACAACAACAACAAGACACAGCTGCTGATTCTTCCTCATCGTCCTCCTTTTCCTCAGCTTCAAAGCAACGCCATCTCAACGACGGAGACAGCAGCGAGGCCGATGGCTGCGCTAATCTCTTCCGCTTCAACAGCGGCGACGGTGCTTCCAGCGTGAACAGCAGCTACCGCTCCACTAGCAGCATCCGGGAGATCGATCTGATACCCTCGGAAGCAGTCTACGACCTCCGCAGCATCGCGGAGAGGATGATCTCGTCCGGCTACCTCCGCGAGTGTATTCAGGTGTACGGCAGCGTGAGGAAGTCCGCCGTGGACGCCAGTTTCCGGAGGCTTGGGATCGAGAAGCTGAGCATAGGCGACGTTCAGCGGCTGGAATGGGAGCAACTTGAAGCCAAGATCAGGCGCTGGATAAGGGCCGCCAAGGTGTGTGTGAGGACTCTCTTCGCCAGCGAGAAGAAACTTTGCGAACAAATCTTCGATGGCGTGGGCACCGCCATCGACGATGCTTGCTTCATGGAGACAGTGAAGGGCCCCGCCATTCAGCTCTTCAACTTCGCCGAGGCCATTAGCATAAGCCGGAGATCCCCTGAGAAGCTCTTCAAGATTCTTGACCTTCATGATGCTTTAATGGACCTTATACCGGACATTGATGTCGTTTTCGACTCCAAGTCCTCCGAGTCCATTCGGATTCAGGCCGCCGAGATACTTTCCCGTTTGGCGGAGGCCGCCCGAGGGATCCTCTCGGAGTTCGAGAACGCCGTGCTTCGAGAACCTTCCAAGGTCCCTGTCCCTGGTGGCACCATTCACCCCTTGACGAGGTATGTTATGAACTATATCAGCTTGATCTCGGATTACAAGCAGACTTTGAACGAGCTTATTGTGTCGAAGCCATCCACAGGGTCTCGGTATTCCGGTGATCCTTCTACTCCGGACATGGATTTCACTGAGCTGGAGGGCAAGACCCCTCTGGCTATCCACTTGATTTGGATCATTGTGATATTGCAGTTCAACTTAGATGGCAAGTCCAAGCACTATAAAGATGCATCTCTTTCTCACCTCTTTATAATGAACAATGTCCACTACATTGTTCAGAAGGTGAGGGGCTCCCCTGAGTTAAGGCAAATGATTGGTGATGAGTATTTGAAGCGCCTCACCGGAAAGTTCCGCCAGGCTGCTACCAGCTACCAGAGGGCAACTTGGGTCAGGGTCTTGTATTGTTTGAGAGATGAGGGACTCCATGTAAGTGGTGGCTTTTCTTCCGGCGTCTCCAGGAGTGCTTTGAGGGAAAGGTTTAAGTCCTTCAATGCCATGTTCGAGGAGGTTCATAGGACTCAAGCTGTTTGGTTGATACCAGATTCTCAGCTCCGTGAGGAGCTCAGAATATCTATATCGGAGAAGCTGATCCCGGCATACCGCTCCTTTCTTGGGCGATTCAGGAGCCATATAGAGAGTGGAAGGCATCCAGAGAACTACATTAAATACTCTGTTGAGGACTTGGAAGATGCTGTTTTGGATTTTTTCGAAGGAACCCCTGTTTCGCAGCACCTGAGGAGGAGATCTCAATGA 1920 0.5286 MESPETLPFETAEKIILRWDSTASEEAREKMIFDGDRQEVDRYLQAVDEIQRSMSSASISDDPKVNCALQIAMARLEDEFRNILISHTNPIEADSLIDPTSLHFTTPEDEEDHDQQQQQQQQQDTAADSSSSSSFSSASKQRHLNDGDSSEADGCANLFRFNSGDGASSVNSSYRSTSSIREIDLIPSEAVYDLRSIAERMISSGYLRECIQVYGSVRKSAVDASFRRLGIEKLSIGDVQRLEWEQLEAKIRRWIRAAKVCVRTLFASEKKLCEQIFDGVGTAIDDACFMETVKGPAIQLFNFAEAISISRRSPEKLFKILDLHDALMDLIPDIDVVFDSKSSESIRIQAAEILSRLAEAARGILSEFENAVLREPSKVPVPGGTIHPLTRYVMNYISLISDYKQTLNELIVSKPSTGSRYSGDPSTPDMDFTELEGKTPLAIHLIWIIVILQFNLDGKSKHYKDASLSHLFIMNNVHYIVQKVRGSPELRQMIGDEYLKRLTGKFRQAATSYQRATWVRVLYCLRDEGLHVSGGFSSGVSRSALRERFKSFNAMFEEVHRTQAVWLIPDSQLREELRISISEKLIPAYRSFLGRFRSHIESGRHPENYIKYSVEDLEDAVLDFFEGTPVSQHLRRRSQ* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1073 639 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 170 639 - -
Amo19g1073 639 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 5 128 - -
Amo19g1073 639 MobiDBLite consensus disorder prediction 95 151 - -
Amo19g1073 639 SUPERFAMILY Cullin repeat-like 26 626 IPR016159 -
Amo19g1073 639 Pfam Exo70 exocyst complex subunit 253 621 IPR046364 GO:0000145|GO:0005546|GO:0006887
Amo19g1073 639 MobiDBLite consensus disorder prediction 118 143 - -
Amo19g1073 639 PANTHER EXOCYST COMPLEX PROTEIN EXO70 5 128 IPR004140 GO:0000145|GO:0006887
Amo19g1073 639 PANTHER EXOCYST COMPLEX PROTEIN EXO70 170 639 IPR004140 GO:0000145|GO:0006887
Amo19g1073 639 Gene3D Exocyst complex component Exo70 103 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1073 Amo-Chr19 19379179 19381866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1073 9 639 EXO70 exocyst subunit family AT1G72470 70.142 0.0 865
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1073 K07195 - gmx:100808671 976.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g1073 19 19379179 19381866 Amo19g1073 19 19379179 19381866 ECH