Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1058 ATGGCTGTGACAGGAGAACAAGGGCACAAATACGGGGAAGGATTTCCCGTGGACCATTCCTGGGAGTTGGGTACAATGGGTATATCAAACGCCAACTACAATTCCATTCTACACATCAACGGTGATTTTCAAGAGGTCAAGGATTTTCGAAAGAGTGTCATAATGTCAGGTGTACCTGCTGCAACTCAAGTTTTCCAAATACTGGGAGAACCGACGCATTCAATTGAAGAGGACCTACTTAACCATTTCATTTATAAGCCCATATCCAAGCTGAAGGATTCAATTGAGTGGTACAAGAGTTGCAAGCATTGCTTCCATTCTTTACAAGAAGCTGAGAACTCATACCACTGTGCTAGGTGTAAGACATACCCATCGTCTCACACCCCAAGGTTTAGCATAAAGATGCAAGTTGCTGAGGAGACTGATACGACTTCCTTCCTACTGTACGATAAGGAAGCGTCCAAATTCCTTGGTATATCTGCATCCGATCTCAGACTTGCACAACTAACCAGGGGTGGAGATGAAGAATATTCAATAGAGCTTAACTCACTGATGGGAAAGAAATTTCTGTTCAAAATTTCTGTGAAAATGGAAGATCTAAATGCATTCCAACCATGTAGCATAATTGTTACTAAGCTCTGTGGGGACAACTCAGTTATCACAAAATTTACTGCGAAGAATAGCTTAGACGAGCAAAATATGGGTATGCAGAATTCTGAACTGCTGAGCATGAACGCTAACTCTGCTGAAACCCCAAAGGGTACAATCTCTCCCTCTGCTGAGACTCTATCCCATGGAACAATTGATGCATTCTCAACTCCAAATAATAAAATCATCATTGGTGGGTGGTTTAAGAAGCTGATCGAACTGTACCCGGATTCTACCCATGCATCATCCTCCAAATGCAGGAAAGTGATAGAAGGTGCCACTGCAACCATTGTCGAGATTCATGATGATTAG 960 0.424 MAVTGEQGHKYGEGFPVDHSWELGTMGISNANYNSILHINGDFQEVKDFRKSVIMSGVPAATQVFQILGEPTHSIEEDLLNHFIYKPISKLKDSIEWYKSCKHCFHSLQEAENSYHCARCKTYPSSHTPRFSIKMQVAEETDTTSFLLYDKEASKFLGISASDLRLAQLTRGGDEEYSIELNSLMGKKFLFKISVKMEDLNAFQPCSIIVTKLCGDNSVITKFTAKNSLDEQNMGMQNSELLSMNANSAETPKGTISPSAETLSHGTIDAFSTPNNKIIIGGWFKKLIELYPDSTHASSSKCRKVIEGATATIVEIHDD* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1058 319 SUPERFAMILY Nucleic acid-binding proteins 88 213 IPR012340 -
Amo19g1058 319 CDD RPA1_DBD_C 88 201 IPR013955 -
Amo19g1058 319 Pfam Replication factor-A C terminal domain 88 202 IPR013955 -
Amo19g1058 319 Gene3D - 76 219 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1058 Amo-Chr19 18685639 18687343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1058 93 210 Core DNA Replication Machinery Family AT5G08020 28.571 3.20e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1058 - - ahf:112707100 377.481