Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1023 ATGCTCAAAGAATCCGAAGAYGTACGTGTTATTGGAATTTGGGGTTTGGGCGGTATTGGTAAGACAACCATTGCAGAAGAAGTATACAACAGAATGTGTGCCRAATTTGAATCTTGTTGTTTCTTGGCAAATGTAAGAAAAGAGTCAGAAAGAGATGGAATAATGTCTTTGAAGAAGAAACTCTTTTCTACACTATTGAATGAACAAAATTTGAGAATTGACTTACCAAAGGGATTGCCTGATTATGTTGAGAAAAGGCTTGGGCGCATGAAGGTTCTCATTGTTCTAGATGATGTGAATGATTCTGACCAGTTAGAAACTTTAATTGGAGCTCRTGATTGGTTTGGATTAGGCAGTAGAATCATTATAACAACTAGAGATAAGCAAGTGCTAGTYGGAGAAGCTGAAGAGATATACCAAGTTGAGGAATTGGATTGTGATGAATCTCTTGAACTCTTCATTCTAAATGCCTTCAAACAAAACCAGTTTGAAATGGAGTATTGTGAGCTGTCAAGGAGGGTGGTCARGTATGCCAAAGGCATTCCATTAGTTGTTAAAGTTTTGGCTCAACTTCTTCGTGGCAAACGAAAGGATATATGGGAAAGTCAATTGGAGAAACTTAAAAGAATGCCTAATAAGAAAGTTCATGATATAATGCGGCTGAGCTATGAYGATCTTGATCGTCAAGAGMAACAGATTTTCTTAGACATTGCCTGTTTTTTCAATGGATTGAAGCTCAAGTTGGAATACATAAACGTTTTACTRAAAGACCAAGATTATGCAGTGGCTGCTGGGATGGAAAGGCTGAAAGATAAGGCTCTTATAATTATTTCTGAGCACAATATTGTATCTATGCATGATATTATTCAAGAAATGGCTTGGGAGATCATTAAAGATGGCTCTGCTGAATACCCTGGAAAYCAACKTCGGTTATGGGATTCTCACGACATATATCAAGGGARTGAGGCCATTAGAAGCATATCCTTCAACTTTTCAGCAATTAAGGACCTTCAGTTAAGCCAAGAAGTCTTTGCTAAGATGAGCAAACTACGATTTCTAAATTTCTAYAGCAACATATCTCAAGAGGCCACGTATAGTTCTGATGGACTTCCATCTTCGTGGAACAAAGGCCTGTGTCTTCCTCAAGAACTTGATTCTTTGTCAAATGAACTAAGATACCTTAGTTGGATGCATTACCCTTTGGATTCCTTGCCAACCAACTTTTCTGCAGAAAATCTAGTAATATTGGACTTGTCCTTCAACCGAATGGAAAAACTTTGGTGTGGGGTGAAGAATCTGGYAAATTTAAGGATCCTTAGATTATATAATTCCTTACACCTGACCATGCTGCCAGACTTGTCGAAAGCCAGAAACCTTGAAATACTAGTTATTCGCAAGAGTTTCAGTTTCCTTTATGTACATCCRTCTGTTTTTTGTCTCAACAAGCTTGAGATATTGGATCTAGGAGGGTGCGTTTCCCTTAGGCAGCTCCGAAGCKATATCCATTTGAGCTCTCTCCGTTCTCTCTCTCTYGCCGGCTGCGTAAGGCTACAGGACTTCTCAGTTACCTCAGAGAATCTGGAAGAKYTGAACTTAGAGCTCACAGGTATCCAACAACTACCGACATCCTTTKGGCGCCAAAGCAAACTCGAAACATTACATCTAGGATTGTCTGATATTCAGAGCATTCCTGAAACCATCAAGAATCTCACAAGGTTCAAGTATCTTAGCATCARATATTGTTGGAACCTSAGGGATTTACCAGAGCTTCCCCCATCTCTTGAGTATCTAGAYGCCACCGGATGCGCATCACTCAAGACAGTGTTGTTTCCATCRTCGGCTGCCTTGCAGCTTAAGGAAAACAGGAAAAGCATTTTGTTCTGGAATTGCTTGAAATTGGATCAACACTCCCTTGGGGCTATTGAATTGAATGCACGAATCAACCTCATGAAATTTGCATACCAGCATTTATCAKCATTAACACATGACTACTATAAAGATAATGACAATGAAGCCATCTATGTGTATCCAGGAAGCAATGTTCCAAAGTGGTTGGAGTATAGAACATCACATGATTAYGTAAATGTTGATATCTCTTCTTCGRCTGCGCCACATTCCCCTTCGTTGGGCTTCATATTTTGCTTCATTGTTCCACGAATCCTCTCGGATGGTTYTRCTTTCAGGTTTACCATAAGTGTTGGTGAAGATGAAGGAAACAATGTCAAATTTTACTTGRAGAAACCACTTGAAAAAATTGTTTCAGATCATGTGTTTCTCGTGTATGATCACCGGCTTACTCACTTCCTTAATAGCAGAAGCAATGTTGAAGTTCAACAGAGGCTTAAAATTAAGGTTGCGGCGGTGACAGACAGGGAAATCAGATTATGTGCCTGTGAAGCTAAAAGGGTTTGGAATCAGTCCAATAAAAGCATCAGAATATCAAAATTTCATTCAGAAAATGGAATTGGTTGA 2472 0.3888 MLKESEDVRVIGIWGLGGIGKTTIAEEVYNRMCAXFESCCFLANVRKESERDGIMSLKKKLFSTLLNEQNLRIDLPKGLPDYVEKRLGRMKVLIVLDDVNDSDQLETLIGAXDWFGLGSRIIITTRDKQVLVGEAEEIYQVEELDCDESLELFILNAFKQNQFEMEYCELSRRVVXYAKGIPLVVKVLAQLLRGKRKDIWESQLEKLKRMPNKKVHDIMRLSYDDLDRQEXQIFLDIACFFNGLKLKLEYINVLLKDQDYAVAAGMERLKDKALIIISEHNIVSMHDIIQEMAWEIIKDGSAEYPGNQXRLWDSHDIYQGXEAIRSISFNFSAIKDLQLSQEVFAKMSKLRFLNFYSNISQEATYSSDGLPSSWNKGLCLPQELDSLSNELRYLSWMHYPLDSLPTNFSAENLVILDLSFNRMEKLWCGVKNLXNLRILRLYNSLHLTMLPDLSKARNLEILVIRKSFSFLYVHPSVFCLNKLEILDLGGCVSLRQLRSXIHLSSLRSLSLAGCVRLQDFSVTSENLEXLNLELTGIQQLPTSFXRQSKLETLHLGLSDIQSIPETIKNLTRFKYLSIXYCWNLRDLPELPPSLEYLDATGCASLKTVLFPSSAALQLKENRKSILFWNCLKLDQHSLGAIELNARINLMKFAYQHLSXLTHDYYKDNDNEAIYVYPGSNVPKWLEYRTSHDYVNVDISSSXAPHSPSLGFIFCFIVPRILSDGXXFRFTISVGEDEGNNVKFYLXKPLEKIVSDHVFLVYDHRLTHFLNSRSNVEVQQRLKIKVAAVTDREIRLCACEAKRVWNQSNKSIRISKFHSENGIG* 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1023 823 Gene3D - 1 139 IPR027417 -
Amo19g1023 823 SUPERFAMILY "Winged helix" DNA-binding domain 213 319 IPR036390 -
Amo19g1023 823 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 787 IPR044974 GO:0006952
Amo19g1023 823 SUPERFAMILY L domain-like 331 672 - -
Amo19g1023 823 Gene3D Ribonuclease Inhibitor 521 609 IPR032675 -
Amo19g1023 823 Pfam NB-ARC domain 2 224 IPR002182 GO:0043531
Amo19g1023 823 Gene3D - 143 227 IPR042197 -
Amo19g1023 823 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 6 787 - -
Amo19g1023 823 Gene3D Ribonuclease Inhibitor 314 520 IPR032675 -
Amo19g1023 823 PRINTS Disease resistance protein signature 178 192 - -
Amo19g1023 823 PRINTS Disease resistance protein signature 478 494 - -
Amo19g1023 823 PRINTS Disease resistance protein signature 10 25 - -
Amo19g1023 823 PRINTS Disease resistance protein signature 86 100 - -
Amo19g1023 823 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 237 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1023 Amo-Chr19 17536068 17540380 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1023 4 599 WRKY Transcription Factor Family AT4G12020 33.861 8.00e-87 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1023 - - ahf:112710439 1565.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g1023 19 17536068 17540380 Amo09g0506 09 6451157 6509561 hybridization