Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1021 ATGAACAACATGAATCATGAGTCGATATCAACATCAACCAATCGTGAATCGGCGATGCTAGACCCGGAGGACGGGCTTTTGAATGAGACAGACATAGAGCCTCAATCTGCTCAGGTACCAAGTCATGTCAACATTGAAGATGTGCTAAAGATGGAGTTCTGTACCCCTGGGGAAGCAAGAGAATTCTACACGAGTTATAGTAGGCTAAAAGGTTTTGCAATAAGGAAGAGTAAGAGGGTAAAAAATGCCAGAGGAGAGATTGTTCGATACAATTTTGTTTGCAACAGACAAGGGTTTAGGCACAAGAAGTGGTTAGATAAGCTGGATAGGAAAAGAGAGCACAAGCCTATAATGCGATGCGGGTGTGTAGCAGAGATGAGGATAAAGAAGAATCATACTAATAGAAAATGGTTTGTTTCACAGTTTATGGAAGATCATAACTACACCCTACTCTCTAAAAGGTTTATTGGATATCTGCCTTCACACAGGAATATGTCTGATGTAGAAATTGCTCAAATGAATAGCATGAGGCAAGTTGGGATAAGCATTCCAAAGATATACCAGTCATTTGCGATGCAAGTTGGGGGCTTTAACTTAGTAAGATTTACTAAGCAAGATATGCACAACGAGGTTCGAAAGCAACTTCAGGTTGGTATTGATATCGGTTCTTTGCCAGAGACTCTGGTCCTCAAAAGGTGGTGCAAAAATGTCAAGAACAATGTGACTTCTGTTAGACAAGTTACAGAAACGGGTGATGTTGCATCCCGGTACCGTAGCAGACTTGGTGCATTTGTAGACCAATGTAAGCGTTTTGCCAAGGTGGCTTGTCTAAGGGACGAGGACTACAAGGTCTTTAGTAAAAAAATGGCACGGGATGCTATCATGTTGGAGGTCAAGAATGGGTTGCGTGTGGCCCCAGATGTGAATCCACAGCTTAACGGTGATGGGGGTGGTGGGATAAATGATCTAGTCTGTGTCCGGACAAAAGGCACTGGCAGAGGAAACGATTCTCATGTTACAAAGGGACCAAAGAAGAGAAAATGCAGTGCCTGTAGAAAACTGGGTCATCGCCAAACTCGCTGCCCCAGTGCGCCTGCCCCGCGACAGGGATGTTGTGGATCGCTACCGGTTCTCGAGGGTTGCCAAGCTCAACCTCAAACGACACCGTCACAGACAACTCGACAAGAGAACTCGACTTTTTTTGCCTCTGAACTTGCTACAAGTTATGTAAGTGCCAATATTGTCCCGTAA 1251 0.4436 MNNMNHESISTSTNRESAMLDPEDGLLNETDIEPQSAQVPSHVNIEDVLKMEFCTPGEAREFYTSYSRLKGFAIRKSKRVKNARGEIVRYNFVCNRQGFRHKKWLDKLDRKREHKPIMRCGCVAEMRIKKNHTNRKWFVSQFMEDHNYTLLSKRFIGYLPSHRNMSDVEIAQMNSMRQVGISIPKIYQSFAMQVGGFNLVRFTKQDMHNEVRKQLQVGIDIGSLPETLVLKRWCKNVKNNVTSVRQVTETGDVASRYRSRLGAFVDQCKRFAKVACLRDEDYKVFSKKMARDAIMLEVKNGLRVAPDVNPQLNGDGGGGINDLVCVRTKGTGRGNDSHVTKGPKKRKCSACRKLGHRQTRCPSAPAPRQGCCGSLPVLEGCQAQPQTTPSQTTRQENSTFFASELATSYVSANIVP* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1021 416 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 6 189 - -
Amo19g1021 416 Pfam FAR1 DNA-binding domain 61 151 IPR004330 -
Amo19g1021 416 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 6 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1021 Amo-Chr19 17484434 17492195 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo19g1021 FAR1 2.5e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1021 - - ahf:112778035 385.571