Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1015 ATGGGAAGGAGTCCTTGCTGTTCTAAGGAAGGTTTGAACAAAGGAGCATGGACAGCTATGGAAGACAAAATTCTCACAGACTACATTAAGATTCATGGTGAAGGAAAATGGAGACACTTACCCAAAAGAGCAGAGATGCGGAAAAAGTTGCAGGCTGAGATGGTTGAATTATCTAAGACCTGGCATTAA 189 0.418 MGRSPCCSKEGLNKGAWTAMEDKILTDYIKIHGEGKWRHLPKRAEMRKKLQAEMVELSKTWH* 63
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1015 62 Gene3D - 11 62 - -
Amo19g1015 62 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 47 - -
Amo19g1015 62 CDD SANT 16 51 IPR001005 -
Amo19g1015 62 ProSiteProfiles Myb-like domain profile. 9 47 IPR001005 -
Amo19g1015 62 Pfam Myb-like DNA-binding domain 14 47 IPR001005 -
Amo19g1015 62 PANTHER TRANSCRIPTION FACTOR TT2 1 47 - -
Amo19g1015 62 SUPERFAMILY Homeodomain-like 8 49 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1015 Amo-Chr19 17365021 17365847 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1015 1 48 MYB Transcription Factor Family AT4G21440 58.333 9.03e-17 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Amo19g1015 Myb_DNA-binding 4e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1015 K09422 - lja:Lj3g3v2613470.1 96.6709