Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0989 ATGCCCTCAAGATTCCTGAATATTAGATTAAAATATATCCAACTCAGTGTGTATGTTGATTTTTGGGAGATAGAGCCGTCGGATAGTGATTTTTTTGGAACAGACTCCGATGAGGAGTTTCCAAGAGGAGACGATCTAGATTTTTTAGACGACGATTTGGAGGCTAATGAAGATAACCCTCAAGATAAGAGAATAGCAGAGTTGTCACGAGAAGATATCATGCAACTTCAGTTTACAGATGAGGAAGTTGTTTTTCGATTCTACAAGACTTATGCAATGATGCACCGTTTTGCTGTGAGGTTGGATGAAGTCAGACGCGATAGTGATGGTTGCGTAATTATGCGCCAAATTGTTTTTAGTCGGGCGGGCACAAAAAAGGAAGAGGTTGAAAAGGACAAAAGAATCAGGGACCACCGACCCCTAACTCGAAGTTGTTGCTGGGCAAGAATTCGTGCAAGACTAGATAGAAAAATTCATAAATGGAAGGTCAAGAAGGAAATTGAGGGTGCTTGTGCTATGAATACAGAGTTGTGTTCTAGGTTGATGGATGTTGCATGTAAGAACTCAAGTGATTTTGTCAAAGCAATGAATGATGTTGTCAACACAATTACAAAACTCCAAAAGCGAGGTGAAAATTCATGCAACGGTAATTTAGACAATGACTACATTGTTGACCTATTGGTGGTGAAGAGTAAAGGAGCTCCCAAGAAAAACTCAAAATTTAAGCAACAGAGAAGGTGTTCAAACTGCGGTATGACAAGGCACTACAACAAAAATTGTCCTAATGTTCCTGGTAGAATCCCAAAGGAGCCGATAGATGATGATACAGAAAAGAATATCAGCAGCCATCCTGACATCCTCACTAAGCACAAAAGACATGACAGTGTGAAAAATCAGCAGAAGATGGAAAAAGATAGGAGCATTGGTGGTGGAACAGCACCAACCTCAACAGCTAAATTGGCTTTTACTAATCAAGTGAAAATATCAAGCCCTGGTTCCGATATCCCAGTTTGTGCATCTACAAGTAACAAAGAGTCCGGGATGAGTTCCAGACCAGGTGAATCTCCTGTTGTGGGCCTTGAAACTGGAATGGCAGATGAAGATTATTCAGATTTTGGGATGATTGGTAATTTTGTACCATTTACTAATTACCTTTTATTGATGTTTTGTATAGTTTGTATTCATTGA 1188 0.3965 MPSRFLNIRLKYIQLSVYVDFWEIEPSDSDFFGTDSDEEFPRGDDLDFLDDDLEANEDNPQDKRIAELSREDIMQLQFTDEEVVFRFYKTYAMMHRFAVRLDEVRRDSDGCVIMRQIVFSRAGTKKEEVEKDKRIRDHRPLTRSCCWARIRARLDRKIHKWKVKKEIEGACAMNTELCSRLMDVACKNSSDFVKAMNDVVNTITKLQKRGENSCNGNLDNDYIVDLLVVKSKGAPKKNSKFKQQRRCSNCGMTRHYNKNCPNVPGRIPKEPIDDDTEKNISSHPDILTKHKRHDSVKNQQKMEKDRSIGGGTAPTSTAKLAFTNQVKISSPGSDIPVCASTSNKESGMSSRPGESPVVGLETGMADEDYSDFGMIGNFVPFTNYLLLMFCIVCIH* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0989 395 MobiDBLite consensus disorder prediction 333 350 - -
Amo19g0989 395 MobiDBLite consensus disorder prediction 291 316 - -
Amo19g0989 395 Pfam FAR1 DNA-binding domain 86 165 IPR004330 -
Amo19g0989 395 ProSiteProfiles Zinc finger CCHC-type profile. 245 262 IPR001878 GO:0003676|GO:0008270
Amo19g0989 395 MobiDBLite consensus disorder prediction 333 357 - -
Amo19g0989 395 SUPERFAMILY Retrovirus zinc finger-like domains 233 268 IPR036875 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0989 Amo-Chr19 16683057 16686243 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo19g0989 FAR1 1.2e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0989 - K17604 aip:107641230 300.441