Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0965 ATGTATATATTATATGTAGTTGTGGGCCATTCTCGGTCTTCTTTTGTTCGTAGGAAAGCATGCAATATGGGTTCCGAAACACCACCTGATGCCCTCTCACCCTCAAGCACCACTTGTAAACAAGATTTGAGATGGCGCGAGGTAGAGAAGGCAATTCCGCTAAAGAAAAGAAGAGGAGAGTTTGATAATAACATGGAAGGAAATATTAGCGACAGCAACAGAAAGAAGACGAACAAAATCCAGAGTCGTAGCAGCAGAACGAAGATGAACATGGCGTGGGAGCAAGATGATGACGAAATTATCAAAGAGGAAGAAAAAGAAGCCGAGGAAGAAGTAGTAGCAGTAGATGAAGAAGAAGAAGAAGAAGAAGTAGAAAAAGTAAGAGAAAGAATCCAAACGAAAAAGGTTAGTAAGAAGAAGAGGGTAAGGGGTGGTGCACTGATGGAAGGTTCTAGATGCAGCCGCGTTAATGGGAGAGGATGGAGGTGTTGTCAGCCAACATTAGTTGGTTACTCACTTTGCGAGCATCATTTAGGAAAAGGAAGGTTGAGAAGCATGACAAGTGTTAGAAGCCGCTCTATTGCTACTCCAACCACTGCTGGTGCACCCAAGAAGCTTCACCGCCAGTTAGTTCCACCATCTCATAATGAAGCTGCTAATTCGTCTTCTTCGTATTCGAACAACAATGCAAAAGAAACCAATTGTGTCGTCGCTCGCCATGATGATGACGGTTATGCTAACCACCACGCTGGAGGCGGTGGCCAAGACGACCATGACGATGAGAAGAAGCCGATGACGGTTACCACCAAGAAGAGGGTGAAGCTTGGAACGGTTAAGGCAAGATCGATAAGCAGCTTGCTGGGACAAACAAACAACGAAATTACTATGCCTGACAACAACAACAATATAATAATAATGTGA 921 0.4408 MYILYVVVGHSRSSFVRRKACNMGSETPPDALSPSSTTCKQDLRWREVEKAIPLKKRRGEFDNNMEGNISDSNRKKTNKIQSRSSRTKMNMAWEQDDDEIIKEEEKEAEEEVVAVDEEEEEEEVEKVRERIQTKKVSKKKRVRGGALMEGSRCSRVNGRGWRCCQPTLVGYSLCEHHLGKGRLRSMTSVRSRSIATPTTAGAPKKLHRQLVPPSHNEAANSSSSYSNNNAKETNCVVARHDDDGYANHHAGGGGQDDHDDEKKPMTVTTKKRVKLGTVKARSISSLLGQTNNEITMPDNNNNIIIM* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0965 306 ProSiteProfiles WRC domain profile. 147 191 IPR014977 -
Amo19g0965 306 MobiDBLite consensus disorder prediction 242 266 - -
Amo19g0965 306 Pfam WRC 149 189 IPR014977 -
Amo19g0965 306 MobiDBLite consensus disorder prediction 188 229 - -
Amo19g0965 306 PANTHER OS02G0773600 PROTEIN 24 300 - -
Amo19g0965 306 MobiDBLite consensus disorder prediction 214 229 - -
Amo19g0965 306 PANTHER - 24 300 IPR031137 GO:0005634|GO:0006351|GO:0032502
Amo19g0965 306 Coils Coil 101 137 - -
Amo19g0965 306 MobiDBLite consensus disorder prediction 61 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0965 Amo-Chr19 16161959 16164850 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0965 149 202 GRF Transcription Factor Family AT2G36400 38.889 9.95e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0965 - - adu:107464773 464.922