Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0963 ATGTACTTTTCTTTGTTACTTAAACATCAATTCTTACCAATCATCATCATCATAATAAGTATTATCACCCTCACCAAAGTTGGTTGCTTCGAGTTCAATTTCCCTACATTCCAACCACAAGATGAATCTCATTTACTGCTAAGCAAATACTCAGAAATCTACCTAGATGCCATCCAAGTAACCCCTGATATCCGTGGCGAAATACGCCATTATTCAGGACGGACATTCCACAATAAACCATTCAGATTATGGAGCAAGAACAAGAAACAAATTGCAAGTTTCAACACCACTTTTGTTCTTAACATCAATCCTCAAACTTCCCCTGGTGGAGAGGGCTTGGCCTTCATCTTAACCGCAAACACCGCTCTCCCGGACAACAGTTCGGGAGAGTGGCTGGGAATTGTGAACGCCACAACTAATGGAACTTCTCAAGCTGGGATTCTTGCTGTGGAATTTGACACAAGAAAAAGTTTTGCAGAAGATGGCCCTGATAACCACGTTGGTATTAACATAAACAGTGTCTATTCCATCAAACAGGAACCATTGTTAATCAAAGGGATTAATATTTCATCAGGTATTAATGTAACTATAAGAATTCAGTATGATAATGATGTTATATCCGTGTTTGGTTCCATGAGTACAAGAACTTCGCCAATGGAGACGCTTTTGGTATCTCCACCACTTAATCTTTCTTCCTATCTTCAGGAAGAGGTTTATGTCGGATTCTCTGCTTCAACGAGTAACTACACTGAGTTGAATTGTGTTAGAGCATGGGAGTTCAACGGTGTAGATATCATTCATGATGATAAGAACCTGTTGTGGATTTGGATAACTGTTGCAACCGTTATTATTATTATGATTGGTGGTGTTGTGTTTCTCCTAATTTGGCGAAGGAATCATGGTGTGGGAGCTTCAGGAGATGCATACCCGAGGATAGAGGATCAGATTCAACATTCATCCATGGCTCCAAAGAAGTTCCGGTTAAAGGAAATTAGAAAAGCAACGGGCGGATTCAGCCTTCAAAACAAGCTTGGTGAAGGTGGTTTTGGAACAGTTTATAAAGGGCTACTCGAAAACAAGGAGATAGCTGTAAAGAGTCACTCGAAGGATTCGCGCCAAGGGAAGCAAGAATTCATAGCCGAAGTCACAACAATCGGAAGCCTCCACCACAAGAATTTGGTCAAACTGATTGGTTGGTGCTATGAAAAAGGAGAGCTCCTTCTTATTTATGAGTACATGCCTAATGGAAGCCTAGACAAGTACCTATTCGATAAGAAAAAAAATCTTGGCAATGAATTTGGGGAAGGATTTAACAATTCAACACTAAATTGGGAAACTAGGCAGAGAGTGATATATGGTGTGGCTCAAGCATTGGACTATCTCCACAATGGTTGTGAGAAAAGGGTGCTTCATAGGGACATCAAGGCCAGCAACATAATGTTAGATTCAGAATTCAATGCCAAGTTAGGGGATTTCGGATTGGCGCGAACCATTCAGAAGAGAAATGAAACTCACCATTCCACAAAGGAGATTGCAGGGACGCCAGGGTACATGTCCCCGGAAACATTCCTCATCGGAAGGGCGACGGTGGAAACCGATGTGTACGCGTTCGGCGTTCTTGTGTTGGAAGTAGTGTGCGGAAGAAGGCCAGGGAATGTGAACGGACAGGATGATTACAAGAACAGCATTGTGTATTGGGTTTGGGAGCTTCACGGAGAGGGGAGAATAGTGAGTGCTGTGGACAAAAAGATAAGTAAAGAAGAGATGAAGGATGAAGAAGCTTCTAGAGTTCTTGTTTTGGGGTTGGCTTGTTGCCATCCAAACCCGCACCATAGGCCTTCAATGAGAACTGTTCTGCAAGTTCTGAACGGGGAAGCACAGCCGCCAGTGGTGCCTCAAGAGAGGCCTGCTTTTGTGTGGCCTGCTGTGCCTCCATCTTTCAATAAAGGTGAAGATACTTATTCAGTCCTCAATGGACAAGTCACTCCCATATTCACTGATATCACTGGTAGGTGA 2016 0.4281 MYFSLLLKHQFLPIIIIIISIITLTKVGCFEFNFPTFQPQDESHLLLSKYSEIYLDAIQVTPDIRGEIRHYSGRTFHNKPFRLWSKNKKQIASFNTTFVLNINPQTSPGGEGLAFILTANTALPDNSSGEWLGIVNATTNGTSQAGILAVEFDTRKSFAEDGPDNHVGININSVYSIKQEPLLIKGINISSGINVTIRIQYDNDVISVFGSMSTRTSPMETLLVSPPLNLSSYLQEEVYVGFSASTSNYTELNCVRAWEFNGVDIIHDDKNLLWIWITVATVIIIMIGGVVFLLIWRRNHGVGASGDAYPRIEDQIQHSSMAPKKFRLKEIRKATGGFSLQNKLGEGGFGTVYKGLLENKEIAVKSHSKDSRQGKQEFIAEVTTIGSLHHKNLVKLIGWCYEKGELLLIYEYMPNGSLDKYLFDKKKNLGNEFGEGFNNSTLNWETRQRVIYGVAQALDYLHNGCEKRVLHRDIKASNIMLDSEFNAKLGDFGLARTIQKRNETHHSTKEIAGTPGYMSPETFLIGRATVETDVYAFGVLVLEVVCGRRPGNVNGQDDYKNSIVYWVWELHGEGRIVSAVDKKISKEEMKDEEASRVLVLGLACCHPNPHHRPSMRTVLQVLNGEAQPPVVPQERPAFVWPAVPPSFNKGEDTYSVLNGQVTPIFTDITGR* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0963 671 CDD STKc_IRAK 344 624 - -
Amo19g0963 671 Pfam Protein kinase domain 339 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g0963 671 Gene3D Phosphorylase Kinase; domain 1 323 412 - -
Amo19g0963 671 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 261 IPR013320 -
Amo19g0963 671 ProSiteProfiles Protein kinase domain profile. 338 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g0963 671 CDD lectin_legume_LecRK_Arcelin_ConA 30 261 IPR001220 GO:0030246
Amo19g0963 671 PANTHER - 15 652 - -
Amo19g0963 671 Gene3D Transferase(Phosphotransferase) domain 1 413 629 - -
Amo19g0963 671 ProSitePatterns Protein kinases ATP-binding region signature. 344 365 IPR017441 GO:0005524
Amo19g0963 671 Pfam Legume lectin domain 31 263 IPR001220 GO:0030246
Amo19g0963 671 SUPERFAMILY Protein kinase-like (PK-like) 319 622 IPR011009 -
Amo19g0963 671 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 15 652 - -
Amo19g0963 671 SMART serkin_6 338 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g0963 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Amo19g0963 671 Gene3D - 29 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0963 Amo-Chr19 16123115 16125366 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0963 72 638 Receptor kinase-like Gene Family AT5G55830 37.705 3.28e-123 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Amo19g0963 Pkinase 2.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0963 - - gmx:100785031 1000.35