Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0934 ATGACTGCCCTTTTAATCATCAACTCTCCAAGTTTCCTTGTGTTAACTTTGTGTCCGGAGCCATGCTCCTTTTTCGTTCGTCACTCCTGCATGAAAGGGGATGACTGCCCTTTTGATCATCAACTCTCCAAGTATCCTTGTGTTAGCTTTGTGTCCGGAGGTTTTTGTGTTAGAGGTGAATGTATGCTTGTTTTCGCACCAGGAAACACAAATTCCAACATGCCACCTAACATTCATGGCTGTGGTTCTATCCAACAAAACCATTTGATCATTCCTCCAAGAGTTCATCTTGACATCAATTCGGAACATAAAGCAACAAACATGGTACAGAAACAGCTTAAGCTTGCATCTAAAGGAGTTAGCTCCGTTGATGTTGCAAAGCTATCGTTGCCTTCTCCTACTACGCCAAAGGAAGGCACGACCAAAGTTGGCTCATCCTCTTCTGACCAAAGGAAAACTTCAATGAATGATGCTTCAACTGGTTTACAAGGTAGTTCTCATGTGGATAACAACGAAAGTAAACCAGTCCAAGAGGCAAGAGGGGCATCTGATTCTTGTCAAATTCCCGCAGCAATACGGTTGCCATTTATGCGTCTGGTTTCTCCTTCATCTTCAGAACAGCTACCATCTAGAAAGGAGCTCTTGTCGACTGTATTGTCATTTGCAGCAGAGCATGAATCAGTTATCAAGATGAAAGATTCTGCTGGCACTTCAACTGCATAA 723 0.4302 MTALLIINSPSFLVLTLCPEPCSFFVRHSCMKGDDCPFDHQLSKYPCVSFVSGGFCVRGECMLVFAPGNTNSNMPPNIHGCGSIQQNHLIIPPRVHLDINSEHKATNMVQKQLKLASKGVSSVDVAKLSLPSPTTPKEGTTKVGSSSSDQRKTSMNDASTGLQGSSHVDNNESKPVQEARGASDSCQIPAAIRLPFMRLVSPSSSEQLPSRKELLSTVLSFAAEHESVIKMKDSAGTSTA* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0934 240 MobiDBLite consensus disorder prediction 127 184 - -
Amo19g0934 240 Gene3D - 19 75 - -
Amo19g0934 240 SUPERFAMILY CCCH zinc finger 20 41 IPR036855 GO:0046872
Amo19g0934 240 ProSiteProfiles Zinc finger C3H1-type profile. 16 43 IPR000571 GO:0046872
Amo19g0934 240 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEI 20 220 IPR045124 GO:0003723|GO:0045892
Amo19g0934 240 MobiDBLite consensus disorder prediction 127 180 - -
Amo19g0934 240 PANTHER PROTEIN SUPPRESSOR OF SABLE 20 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0934 Amo-Chr19 15433519 15435163 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Amo19g0934 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0934 - - aip:107615152 271.166