Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0931 ATGCCTCTTGTTTCCACCCCATATCCAGTCTGGTCCATGTACCTCTTCCATGCTTCCTTTCTCTTTTATGTATACTTAGTGTGGCTACAGCTTACAACAGCCGCCACCGCCGCCTTGGGAAATGATACTGATTTCATGGCATTGCTTAAGTTCAAAGAATCAATATCTGATGACCCACACGGAGTTTTGACATCATGGAACACCTCTACCCACTTTTGTAACTGGCATGGAGTCGCATGCAGCACCAAACATCAAAGGGTTGTAATGTTGAATCTTAAAAGATCTGATTTGCGTGGGATTATATCGCCTTATATTGGCAATCTCTCCTTTTTGAGAAACCTTTACCTCCAAAACAATAGCTTCTATGGAGAAATTCCAACGGAGTTGGGTCGTTTGTTCAGACTACAACAACTCTCACTCTCAAACAACATACTAACAGGGGAGTTTCCTATCAAATTGACAAATTGCTCTGATCTAAGGCACGTAAATGTGTCAAGCAACAATCTCCATGGCAAAATACCAATAGAGATTGGATCACTAAGGAAGCTTGAAAAGCTGAATCTTTTCACAAATAATTTCTCCGGACAAATCCCACCTACCATGTGGAATATTTCTTCTCTTGATGTTCTCTCTCTGGCCTATAATAACTTGGAGGGCAATTTACCAGAAGAAATGGGACAACTTAGAAACTTGTCAGTTTTTGCAGTACCTGGAAACAAATTGTCCGGTACACTTCCTGCTTCACTTTACAATATGTCATCTCTCTTTTTCATCACAGCTGCAGAAAACCAATTTCACGGCTCCCTTCCAGCCAACATGTTCTCCACCCTCACCAATCTGCAGGTGTTTGGCATTGGAGCAAATCAAATGTCAGGTCCTATCCCAACTTCCATCACAAATGCATCTTTACTTCAAGTATTTGATATTGGTGTTAACAGTTTTGTTGGACAAGTTCCAAGTCTAGGAATGTTGAAACACCTTCACTGGCTAAACTTAAATTATAATAATCTAGGCAATGGTTCAGATAATGACTTGGATTTTACTACATCTTTGGTAAATTGTACCAAATTGGAAAATTTGATTTTGTCAACCAACAAATTTGGGGGTCCTTTGCCCAACTCCATAGGTAATTTGTCAAGCCAACTCATTCGACTATATCTTGGTGATAACCAGATATATGGAACTATTCCTGAATCTATAGGAAATTACATAAATTTAATTGCCTTGGTTCTAGAATACAATCAATTTACTGGGACTGTTCCAAATACTTTTGGGAAGCTTCATAAGCTCCAACTGTTAGGTTTGGGGATAAACCAACTATCAGGACAGATACCTAGCTCCTTGGGTAATCTTACTCAATTGCTTCAAATAAGCATTTCAAACAACAAGTTGGAAGGAAAAATTCCACCCATAGTTGGAAATTGGCAAAAGTTACAATACCTGGAACTTTCAGGGAACAATCTTAGTGGTGCTATACCTTTGGAGGTATTCAGCCTTTTCACCTTGTCAACATTGTTGAACTTATCTCATAACTCATTTTCTGGCACTATACCCGTTGAGGTAGGAACCCTTAATAACCTTGGCACTCTGGATCTATCTAAAAATGATCTGTTTGGAGAGATTCCCACAACCATAGGAGAGTGTATAAATTTGGAATACCTAAACTTACAGGGGAATTCCTTCTATGGGACAATACCTCCATCAATTGCTTCATTAAAGAGCCTCATCCAATTGGATCTATCACAAAATAAATTGTCTGGATCGATTCCAACAGCATTGCAGAGCCTTTCTCTACTAACATACTTAAATTTGTCTTTCAATAAATTGGATGGCAAGGTACCAACAGAAGGAGTTTTCAAGAATACAAGTGCAATATCAATAGCAGGCAACAAGAAGCTTTGTGGGGGCATCTCAAAGCTCCACTTGCCACCATGCCCCAATACTAACCAACAAAAAAAGCAGCATAACTTGAAGCTAGTGAGAATCATAATTTGTGTGGTCATTTGTCTTCTACTGTTGTCAATTCTTACTATATGTTGGAGTAGGAGGCAAAAGCAACTATCATCTTTGATATCAAAAACAACAGACCAGAGCTCGATAGTGTCGTACCAAAGCTTATATGCTGCTACAGAAAGGTTTTCTACCAACAATTTGATTGGTTCTGGGAGTTTTGGTTCTGTGTACACAGGATTCCTAAAATCAGAAGACAGGGTCGTTGCCATAAAGGTGATCAACCTTCAAATGAGAGGAGCTCATAAGAGTTTCGTCACTGAATGCAATGCACTAAGAGTTATTAGACATCGAAACCTTGTGAAGATTCTTACATGCTGCTCAAGCATAGATTATCGCGGGGAAGAATTCAAAGCACTAGTTTTTGAGTACATGTCTAATGGAAGCTTAGAAAAGTGGCTGCATCCACAAGGTGAAACTGCAGATCCAACACATACTTTGGACCTTGCTCACAGATTAAATATTCTTATAGATATAGCTTCAGCGTTACATTATCTTCACTATGAGTGTGAACAACCTATTGTTCATTGTGATATAAAGCCAAGCAATGTGCTTCTTGATGATGACATGGTAGCTCATGTGACTGATTTTGGATTAGCAAGGATTCTCTCAACAATAAATGGCTCCTCTCATAACCAATCCAGCACAAGTGGATTCAAAGGAACCATTGGATATGCTCCTCCAGAGTATGGAATAGGTTCTGAGGTGTCAACACAAGGTGATGTATATTCTTTCGGGATTCTAGTATTGGAAATGCTAACTGGCAGAAGACCCACGGAAGAATTTTTTGAAGACGGTGACAATCTTCATAACTATGTGGAAAGGGCATATCCAGAGAAGCTTTTGGAGATTGTGGACTCAACCTTTCTACTGAAACAATTAGAGAAACCATTAGCAGAAAAAGAAGGCAACATAGTGTCGTGTGTATTTTCTCTAATCAAAATTGGACTAGCTTGCTCAGTTGAATCTCCAAGAGAAAGAATAAATATGAGGGATGTCATTAGGGAGCTAAATGTAACCAGAAAAGCATTTCTTTGTGGTTTAGTAAATGTGGAGTATTGTTGA 3075 0.3899 MPLVSTPYPVWSMYLFHASFLFYVYLVWLQLTTAATAALGNDTDFMALLKFKESISDDPHGVLTSWNTSTHFCNWHGVACSTKHQRVVMLNLKRSDLRGIISPYIGNLSFLRNLYLQNNSFYGEIPTELGRLFRLQQLSLSNNILTGEFPIKLTNCSDLRHVNVSSNNLHGKIPIEIGSLRKLEKLNLFTNNFSGQIPPTMWNISSLDVLSLAYNNLEGNLPEEMGQLRNLSVFAVPGNKLSGTLPASLYNMSSLFFITAAENQFHGSLPANMFSTLTNLQVFGIGANQMSGPIPTSITNASLLQVFDIGVNSFVGQVPSLGMLKHLHWLNLNYNNLGNGSDNDLDFTTSLVNCTKLENLILSTNKFGGPLPNSIGNLSSQLIRLYLGDNQIYGTIPESIGNYINLIALVLEYNQFTGTVPNTFGKLHKLQLLGLGINQLSGQIPSSLGNLTQLLQISISNNKLEGKIPPIVGNWQKLQYLELSGNNLSGAIPLEVFSLFTLSTLLNLSHNSFSGTIPVEVGTLNNLGTLDLSKNDLFGEIPTTIGECINLEYLNLQGNSFYGTIPPSIASLKSLIQLDLSQNKLSGSIPTALQSLSLLTYLNLSFNKLDGKVPTEGVFKNTSAISIAGNKKLCGGISKLHLPPCPNTNQQKKQHNLKLVRIIICVVICLLLLSILTICWSRRQKQLSSLISKTTDQSSIVSYQSLYAATERFSTNNLIGSGSFGSVYTGFLKSEDRVVAIKVINLQMRGAHKSFVTECNALRVIRHRNLVKILTCCSSIDYRGEEFKALVFEYMSNGSLEKWLHPQGETADPTHTLDLAHRLNILIDIASALHYLHYECEQPIVHCDIKPSNVLLDDDMVAHVTDFGLARILSTINGSSHNQSSTSGFKGTIGYAPPEYGIGSEVSTQGDVYSFGILVLEMLTGRRPTEEFFEDGDNLHNYVERAYPEKLLEIVDSTFLLKQLEKPLAEKEGNIVSCVFSLIKIGLACSVESPRERINMRDVIRELNVTRKAFLCGLVNVEYC* 1025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0931 1024 Gene3D Phosphorylase Kinase; domain 1 676 794 - -
Amo19g0931 1024 SUPERFAMILY L domain-like 42 337 - -
Amo19g0931 1024 ProSiteProfiles Protein kinase domain profile. 713 1015 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g0931 1024 Gene3D Ribonuclease Inhibitor 343 649 IPR032675 -
Amo19g0931 1024 Gene3D Ribonuclease Inhibitor 155 235 IPR032675 -
Amo19g0931 1024 Pfam Leucine rich repeat N-terminal domain 42 81 IPR013210 -
Amo19g0931 1024 Gene3D Ribonuclease Inhibitor 236 342 IPR032675 -
Amo19g0931 1024 SUPERFAMILY L domain-like 380 635 - -
Amo19g0931 1024 Pfam Protein kinase domain 714 953 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g0931 1024 SUPERFAMILY Protein kinase-like (PK-like) 694 1007 IPR011009 -
Amo19g0931 1024 CDD STKc_IRAK 719 1008 - -
Amo19g0931 1024 PANTHER LRR RECEPTOR-LIKE KINASE 29 1016 - -
Amo19g0931 1024 SMART serkin_6 713 1015 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g0931 1024 SMART LRR_typ_2 596 621 IPR003591 -
Amo19g0931 1024 SMART LRR_typ_2 475 499 IPR003591 -
Amo19g0931 1024 SMART LRR_typ_2 108 132 IPR003591 -
Amo19g0931 1024 SMART LRR_typ_2 572 595 IPR003591 -
Amo19g0931 1024 SMART LRR_typ_2 427 451 IPR003591 -
Amo19g0931 1024 SMART LRR_typ_2 524 548 IPR003591 -
Amo19g0931 1024 SMART LRR_typ_2 204 228 IPR003591 -
Amo19g0931 1024 ProSitePatterns Serine/Threonine protein kinases active-site signature. 844 856 IPR008271 GO:0004672|GO:0006468
Amo19g0931 1024 Pfam Leucine rich repeat 550 609 IPR001611 GO:0005515
Amo19g0931 1024 Gene3D Transferase(Phosphotransferase) domain 1 795 1015 - -
Amo19g0931 1024 PANTHER OS04G0122200 PROTEIN 29 1016 - -
Amo19g0931 1024 ProSitePatterns Protein kinases ATP-binding region signature. 719 742 IPR017441 GO:0005524
Amo19g0931 1024 Gene3D Ribonuclease Inhibitor 43 154 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0931 Amo-Chr19 15399747 15403335 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0931 36 1015 Receptor kinase-like Gene Family AT3G47570 45.921 0.0 852
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Amo19g0931 Pkinase 1.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0931 - - gmx:100785561 1113.98