Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0929 ATGTTCTTAACTTCAATGCGACTCCTCTTCTTTTATGTATTCTTTGTGTGGCTTAAAGCTTCACTAGCCACCAACATTTTAGGAAATGAGACCCATGTTATAGCATTGCTTCAGTTTAAAGAATCAATATCCAATGATCCATATGGAGTTTTAAGCTCATGGAATACTTCAAGCCACTTCTGCAACTGGCATGGAATCACATGCAGCATTAAGCATCAAAGAGTGCAACAGTTGAGCCTTCAACAATGTCGTTTGTTCAGATTACAACAACTCTACCTCCCGGATAACAAACTGACAGGAGAGTTTCCTGTCAGTTTGGCTAATTGCTCGGAGCTAAGGCTTCTAAACATGTCGAATAACAGTCTCTACGGCCGAATACCAATGGAGATTGGAACTCTTAAGAAGCTTCAAAAAATGTTGAGTCTTAACAAGAATAACTACTCTGGAGAAATTCCATCTTCCATAAGGAATATCTCTTCTCTAAGTATTCTTCCTATGGGTTATAATTACTTAGAAGGGAAGATACCTGAAGAAATTGGAAAATTAAAAAGCTTATCAGGTTTTGCCATTGGTGCCAATAAACTGTCCGGGGAGCTTCCTTCCTCGCTTTACAATATGTCGTCGCTCGCTATTTTCTATGCTGCAGATAACCAGTTTCAAGGCTCTCTTCCATCCAACATGTTCTCCAACCTCATCAATCTGCAAGAGATTGGCATTGGAGGGAATCAAATTTCAGGTCCAATTCCAACTTCTATTTCGAATGCATCTTCCCTTCAACTTTTTTATATTGGCTATTGCCGTTTTGTTGGAAAAGTTCCAAATCTAGGAAACCTGAAGGATCTTTATTGGCTAAATTTAAACTACAACAATCTTGGTAGTGATTTAGCTCTAGACTTGGATTTCATAACATCTTTGATTAATTGTACTGAATTGGAAAGTTTGGTTTTGAGTTCCAACAATTTTGGAGAAAATGCAACTATTGAGTTTGGGTGCAAACCACTTATTGGTGACATACCTTTCTCCTTGGGTAACCTCACTCAACTGGTTGAAATAAGAATTTCAAATAACATGTTTCATGGGAAAATTCCACCAAGTATTGGAAATTGGCAAAACTTGTTGTACTTAGATTTTTCAGGAAACAATTTTAGTGGTGCTATACCAGTGGAAGTTTTTAGCCTTTCATCTTTGTCCACAAATCTGAACTTATCTCATAATTCACTGAATGGCACTCTTCCTGTTGAGGTTGGAGCTCTTGGAAACCTTGGAACTTTGGATATCTCCAATAACTATCTATCTGGCCAGATTCCTATGACTATTGGAAAGTGCACAAGTATGGAATATTTAGACTTACATGGTAATTCTTTCAGTGACATGATACCTTCATCAATAGCTTCATTGAAAGGCCTCTCTCATTTGGATCTCTCGCAAAATAACTTATCCGGATCAATTCCAACAGATATGCAGAGGCTTTCTTTTCTAACATATTTGAATGTGTCTTTCAATATGCTAGAAGGGAAGGTACCATTAGAGGGTGTATTCAAGAATGCAACTGCAATTTCAATTGTTGGCAATAATAAGCTTTGTGGAGGTGTCTTACAGTTACATCTTGCACCATGCCCTGCCAACAAGAAAAAAAGAACATCATCTTTGACAGCATCAACAAGTCAGCCATCAATGGTGTCATACCAAATCCTACATCATTCAACACAGGGGTTTACTACCAGTAACTTGATTGGATCTGGTAGCTTTGGTTCTGTGTATAAAGGATTCCTTGAATCTGAACACAAGTTTGTCGCCATAAAGGTGATAAACCTTCAAATGAGTGGAGCTCACAAGAGTTTCATTGCTGAATGTAATGCTCTAAAATTTATCAGGCATCGAAATCTGGTGAAGATTTTAACATGTTGCSCGAGCATAGATTATAGRGGCCAAGAATTTAAAGCATTAGTGTTTGAGTACATGCCTAATGGAAGCTTAGAAAAGTGGTTGCATCCTAGTGCTGAAATCACAGATAGGCTATATACATTAGACCTTACTCAAAGACTAAATATTGTTATCGATGTGGCATCTGCATTACATTATCTTCACTATGGATGTGAACAACCTGTTGTTCATTGTGATCTAAAGCCAGAGAATGTGGTTCTTGATGATGACATGGTTGCTCATGTGACTGATTTTGGATTAGCAAGGCTTCTCTCAATGACTAATGGTGATCCTCATAATCAATCTAGCACAACTGTGTTAAAGGGAACTATTGGATATGCTCCTCCAGAGTATGGAATGAGTTGTGAGGTGTCAATGCAAGGTGATGTGTATTCTTTTGGAATTCTAGTATTGGAAATGGTGACCGGAAGGAGGCCAATGGAAGAAATGTTAAAAGATGATAACAATCTTCATAACTATGTGAAGATGGCATACTCACACAATCTTCTAGAGATTACGGACTCAACTCTTTTGCCAAAACAAATTGGAGAAGAAGAAAACTACACAAAGAAGCTAACCATGTGTGTATTTTCTCTAATTAGAGTTGGACTTGCTTGTTCAGTTGAATCACCGAATGAAAGAATGAACATGGCAGATGTCACTAGGGAGCTAAACCTTACCAAAGATGTATTTCTTCGAGATTGA 2628 0.3779 MFLTSMRLLFFYVFFVWLKASLATNILGNETHVIALLQFKESISNDPYGVLSSWNTSSHFCNWHGITCSIKHQRVQQLSLQQCRLFRLQQLYLPDNKLTGEFPVSLANCSELRLLNMSNNSLYGRIPMEIGTLKKLQKMLSLNKNNYSGEIPSSIRNISSLSILPMGYNYLEGKIPEEIGKLKSLSGFAIGANKLSGELPSSLYNMSSLAIFYAADNQFQGSLPSNMFSNLINLQEIGIGGNQISGPIPTSISNASSLQLFYIGYCRFVGKVPNLGNLKDLYWLNLNYNNLGSDLALDLDFITSLINCTELESLVLSSNNFGENATIEFGCKPLIGDIPFSLGNLTQLVEIRISNNMFHGKIPPSIGNWQNLLYLDFSGNNFSGAIPVEVFSLSSLSTNLNLSHNSLNGTLPVEVGALGNLGTLDISNNYLSGQIPMTIGKCTSMEYLDLHGNSFSDMIPSSIASLKGLSHLDLSQNNLSGSIPTDMQRLSFLTYLNVSFNMLEGKVPLEGVFKNATAISIVGNNKLCGGVLQLHLAPCPANKKKRTSSLTASTSQPSMVSYQILHHSTQGFTTSNLIGSGSFGSVYKGFLESEHKFVAIKVINLQMSGAHKSFIAECNALKFIRHRNLVKILTCCXSIDYRGQEFKALVFEYMPNGSLEKWLHPSAEITDRLYTLDLTQRLNIVIDVASALHYLHYGCEQPVVHCDLKPENVVLDDDMVAHVTDFGLARLLSMTNGDPHNQSSTTVLKGTIGYAPPEYGMSCEVSMQGDVYSFGILVLEMVTGRRPMEEMLKDDNNLHNYVKMAYSHNLLEITDSTLLPKQIGEEENYTKKLTMCVFSLIRVGLACSVESPNERMNMADVTRELNLTKDVFLRD* 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0929 875 Gene3D Ribonuclease Inhibitor 229 327 IPR032675 -
Amo19g0929 875 Gene3D Ribonuclease Inhibitor 328 548 IPR032675 -
Amo19g0929 875 Gene3D Ribonuclease Inhibitor 25 84 IPR032675 -
Amo19g0929 875 Pfam Leucine rich repeat N-terminal domain 35 69 IPR013210 -
Amo19g0929 875 SUPERFAMILY Protein kinase-like (PK-like) 545 866 IPR011009 -
Amo19g0929 875 SUPERFAMILY L domain-like 30 322 - -
Amo19g0929 875 PANTHER LRR RECEPTOR-LIKE KINASE 18 85 - -
Amo19g0929 875 PANTHER LRR RECEPTOR-LIKE KINASE 544 873 - -
Amo19g0929 875 PANTHER LRR RECEPTOR-LIKE KINASE 83 323 - -
Amo19g0929 875 ProSitePatterns Protein kinases ATP-binding region signature. 578 601 IPR017441 GO:0005524
Amo19g0929 875 PANTHER LRR RECEPTOR-LIKE KINASE 330 548 - -
Amo19g0929 875 PANTHER OS04G0122200 PROTEIN 330 548 - -
Amo19g0929 875 SMART serkin_6 572 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g0929 875 PANTHER OS04G0122200 PROTEIN 18 85 - -
Amo19g0929 875 PANTHER OS04G0122200 PROTEIN 544 873 - -
Amo19g0929 875 PANTHER OS04G0122200 PROTEIN 83 323 - -
Amo19g0929 875 ProSitePatterns Serine/Threonine protein kinases active-site signature. 703 715 IPR008271 GO:0004672|GO:0006468
Amo19g0929 875 Gene3D Phosphorylase Kinase; domain 1 552 653 - -
Amo19g0929 875 SUPERFAMILY L domain-like 303 529 - -
Amo19g0929 875 Pfam Protein kinase domain 573 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g0929 875 ProSiteProfiles Protein kinase domain profile. 572 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g0929 875 Pfam Leucine rich repeat 444 503 IPR001611 GO:0005515
Amo19g0929 875 Gene3D Transferase(Phosphotransferase) domain 1 654 872 - -
Amo19g0929 875 Gene3D Ribonuclease Inhibitor 85 228 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0929 Amo-Chr19 15326774 15329968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0929 22 874 Receptor kinase-like Gene Family AT3G47570 39.799 0.0 668
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Amo19g0929 Pkinase 9.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0929 - - ahf:112708871 1170.99