Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0890 ATGATGAAATCAGATATCATTACCATGGATTATTCCCTTTCACTTCCAACAATAACGTTGATATCCCTAACTTTATTTTTTCTCTACAACATATGGAGAATAATTACGAAAAAACCTAGTATTCATCAAAAAGAAAGTAACATTATTAAACAACCGCCACAACCATTTGTTGCATTACCATTAATTGGTCACCTCCATTTACTAGGAACCAAAACACCACTTCACAGAACCTTTGCTTCTTTGGCTGATAAATATGGCCCTGTATTCCAAATCTACTTTGGATCATTACCTGCCATTGTTATCTCCAACAAAGAAGGAATCAAAGAATGCTTCACAAAAAATGACAAAGTTCTGGCCTCGCGCACCCCTTCGAGCCGTGGAACTCACCTTGCTTATAACAATGCTGCGTTTGGATTTGCTCCTTATGGACCCTATTGGGCAAAACAGAGGAAGCTAGCCGTTCTTGAACTCCTCTCTTCGCGCCGCCTCGAATCGTTGAGGCATGTTTATGAATCCGAGATTGATACTTTGATCAAGGATCTCTTGATACACCTTAGCAACAATAATTCTTCTATGGTTGTCATGAGTGAATGGTTTGAACGCTTAACATTTAATGTGATCACAAAAATTGTTGCGGGAAAGAGATATTTTAGTTACTTGGAAGATGTGGATGATTTAGAAGCACATAAAGTTGTGAATCTTGTAAAAGAGTTCATGCAATTGGCTGGTGGATTTGTTCTTTCGGATGCAATTCCATTGCTTAGATGGATTGGTGTGGAAGGGAGAGTTCTTAAATCAATGAAGAGAATTGGAAGAGATTTGGACACACTCATTGGAAGGTGGGTTGAAGAGCATAAGATGAAGGGTAATATGGTAAATAGCTCAAGTGAAAAGCAAGATTTCATTGATGTCATGCTATCTATTGTTGAAGATGATCCTGAGTCTGGACATTCTCGTGACACTATCATTAAGGCACATGTTATGAATCTTATCCTAGCGGGGACGGAAACAACATCAACAACAATGACATGGATCCTTGCAGCATTAATGAACAATAAACATTCATTGAAGCTAGCACAAGAAGAGATTAACCATCACGTAGGTAAGGACAGAAAGGTAGAAGCATCAGATATAAAAAACCTTACTTATTTACAAGCAATTTTCAAAGAAACCCTAAGGTTATATCCACCAACACCATTGTTATTACCTCATGGGGCATCATCAGATTGCAGCATCAATGGCTACTACGTACCAAAAGGAGCTGATGTGTTTCTTAATGTGTGGAAGCTACATAGAGATCCAAGTATTTGGTCGGAGCCTGAAAAGTTTTCACCGGAGAGGTTTATTAATGGCGATGGAGAAGTCGATGAAGGTCACCATTTTGAGTACCTTCCTTTTGGGTTAGGGAGAAGGGCTTGTCCTGGATTCACATTAGCAACACAAGTGATTCTTATCACAGTTGCACGTTTGCTTCAAGGGTTTGATTTTCATTTGTTTATGGATGAACCTGTTGACATGAGAGAAGGTTTTGGCCTAACTTTGCTGAAGTTAAATCCATTGCAAATTTGTCTCACTCCACTTGTTACCACTGAACTCTATCAGTCACATATTTATTAA 1617 0.3865 MMKSDIITMDYSLSLPTITLISLTLFFLYNIWRIITKKPSIHQKESNIIKQPPQPFVALPLIGHLHLLGTKTPLHRTFASLADKYGPVFQIYFGSLPAIVISNKEGIKECFTKNDKVLASRTPSSRGTHLAYNNAAFGFAPYGPYWAKQRKLAVLELLSSRRLESLRHVYESEIDTLIKDLLIHLSNNNSSMVVMSEWFERLTFNVITKIVAGKRYFSYLEDVDDLEAHKVVNLVKEFMQLAGGFVLSDAIPLLRWIGVEGRVLKSMKRIGRDLDTLIGRWVEEHKMKGNMVNSSSEKQDFIDVMLSIVEDDPESGHSRDTIIKAHVMNLILAGTETTSTTMTWILAALMNNKHSLKLAQEEINHHVGKDRKVEASDIKNLTYLQAIFKETLRLYPPTPLLLPHGASSDCSINGYYVPKGADVFLNVWKLHRDPSIWSEPEKFSPERFINGDGEVDEGHHFEYLPFGLGRRACPGFTLATQVILITVARLLQGFDFHLFMDEPVDMREGFGLTLLKLNPLQICLTPLVTTELYQSHIY* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0890 538 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 466 475 IPR017972 GO:0005506|GO:0016705
Amo19g0890 538 PANTHER CYTOCHROME P450 82C3-RELATED 22 533 - -
Amo19g0890 538 Pfam Cytochrome P450 53 523 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g0890 538 PRINTS P450 superfamily signature 333 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g0890 538 PRINTS P450 superfamily signature 386 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g0890 538 PRINTS P450 superfamily signature 464 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g0890 538 PRINTS P450 superfamily signature 473 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g0890 538 SUPERFAMILY Cytochrome P450 52 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g0890 538 PANTHER CYTOCHROME P450 FAMILY PROTEIN 22 533 - -
Amo19g0890 538 PRINTS E-class P450 group I signature 82 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g0890 538 PRINTS E-class P450 group I signature 202 220 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g0890 538 PRINTS E-class P450 group I signature 322 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g0890 538 PRINTS E-class P450 group I signature 342 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g0890 538 PRINTS E-class P450 group I signature 385 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g0890 538 PRINTS E-class P450 group I signature 426 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g0890 538 PRINTS E-class P450 group I signature 463 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g0890 538 PRINTS E-class P450 group I signature 473 496 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g0890 538 Gene3D Cytochrome P450 41 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0890 Amo-Chr19 14613247 14616078 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0890 53 533 Cytochrome P450 AT4G31940 46.545 7.94e-154 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0890 - - adu:107464642 1027.7