Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0888 ATGGATTTGGATACTACCACTTATTGTGTCCAACCTTTTGCTGCAATTTTAGCTTTGTTAATCTTATACTACTTCACCATAAGGTCCATCAGATCACATAATAATAGTGGATCCAAAAAAAGAAATATCAAAACCAAAGTTCCTGAAATACCAGGTGGTTTACCCATCATAGGTCACCTTCATCTCCTCAATGATAAAATCCCTTATTTTAGAACCTTCTCAGCCATGGCCGACAAATACGGCTCAATCTTTGCTCTTCGGCTCGGCTGCCACCCTACAATCATGGTGAGCAGCGCAGAGCTCGCCAAGGAATGCCTCACAACTAAAGACAGAGTCTTCGCCTCGCGGCCGGGCACAGCCGGAGGCAGATTCCTTGGCTATGACAATGCCATTTTTGGTCTCGCGCCATACGGACAGTACTGGCGCGAGATCAGAAAAATTGCGACGCTCGAGCTTCTCTCGAGTTACAGGCTTGAGAAGCTGAAACATATCAGAGACAGAGAGATTTATACTCTTGTCAAAGATTTGTTCAGTTTTTGTAACTGCCACGGGAACTCGAATAAGTTAGTTAGTGTAACCATAAGTGATTTAATAGAGCACATGACGTTTAACATTAATGTGCAGATGATAGCAGGGAAAAGGTTCAGTGATGAAGCGATTAAGGAAGAAGATAGTGAAGGATGGAGATTAAGGAAAGCGATTAGAGATGCTACTTATCTTTTTGGTGTTTTTGTTGTAGCTGATGCGATTCCATGGCTTGGTTGGTTTGATTTTCAAGGGTATGTGGGTTTTATGAAGAGAACTGCTAAGGAATTGGACTCTATTCTTCATAGGTGGATGGATGATCATATGAGAAAAAGAGGTGATGATGAGAATGGTAATAAATCTGAGAATGATTTCTTGGATGTACTAATTTCAGTATTTGAAGAAAATGATGAGATTTATGGCCATAAGAGGGACATAGTTCTCAAAGCAACAACACTGATGCTTGTCCTAACTGGATCAGGAAGCACAGCCATGACATTAACATGGTCACTTTCCTTGCTCTTAAACCACCCAAACGCCATGAAAGCTGCCAAAGAAGAGTTGGATACCGTCATTGGAAAACACAAATGGGTCCAAGAATCGGATATCAAAGACCTCAAATACCTCCAAGCCATTGTCAAAGAGACTCTTCGGCTCTACCCACCGGCACCCTTAACCGGAATCAGGGAAGCCACAGAAGACTGCTATCTAAACGGTTACTATGTCTCAAAGGGCACTCGCTTGTTCATCAATCTATGGAAGCTCCATAGGGATCCCAAAACATGGTCTAATCCTGATGCTTTTGAGCCTGAGAGGTTCCTTAACGCTTGTTCGGGGATCGATTTTCGCGGTCAGGACTTCGAGTTTATACCGTTTAGCTCAGGAAGAAGGTCGTGCGCTGGCATGACGTTTGGATTGCAAGTTGTGCATCTGACATTGGCGAGGTTGATTCAAGGTTTCGATATGTCAAGAAAGAGTGGTGCTGAAGTTGATATGAGTGAAGGGTTAGGTGTGGCCTTGCCTAAGAAACATGCCCTTGATATTGTTCTCAAACCTCGTCTTCCTTTGGAGCTATATGAAGGCCTTTGA 1614 0.4312 MDLDTTTYCVQPFAAILALLILYYFTIRSIRSHNNSGSKKRNIKTKVPEIPGGLPIIGHLHLLNDKIPYFRTFSAMADKYGSIFALRLGCHPTIMVSSAELAKECLTTKDRVFASRPGTAGGRFLGYDNAIFGLAPYGQYWREIRKIATLELLSSYRLEKLKHIRDREIYTLVKDLFSFCNCHGNSNKLVSVTISDLIEHMTFNINVQMIAGKRFSDEAIKEEDSEGWRLRKAIRDATYLFGVFVVADAIPWLGWFDFQGYVGFMKRTAKELDSILHRWMDDHMRKRGDDENGNKSENDFLDVLISVFEENDEIYGHKRDIVLKATTLMLVLTGSGSTAMTLTWSLSLLLNHPNAMKAAKEELDTVIGKHKWVQESDIKDLKYLQAIVKETLRLYPPAPLTGIREATEDCYLNGYYVSKGTRLFINLWKLHRDPKTWSNPDAFEPERFLNACSGIDFRGQDFEFIPFSSGRRSCAGMTFGLQVVHLTLARLIQGFDMSRKSGAEVDMSEGLGVALPKKHALDIVLKPRLPLELYEGL* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0888 537 PRINTS E-class P450 group I signature 77 96 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g0888 537 PRINTS E-class P450 group I signature 101 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g0888 537 PRINTS E-class P450 group I signature 201 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g0888 537 PRINTS E-class P450 group I signature 342 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g0888 537 PRINTS E-class P450 group I signature 385 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g0888 537 PRINTS E-class P450 group I signature 426 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g0888 537 PRINTS E-class P450 group I signature 464 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g0888 537 PRINTS E-class P450 group I signature 474 497 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g0888 537 PANTHER CYTOCHROME P450 82G1 13 535 - -
Amo19g0888 537 Pfam Cytochrome P450 48 519 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g0888 537 PRINTS P450 superfamily signature 333 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g0888 537 PRINTS P450 superfamily signature 386 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g0888 537 PRINTS P450 superfamily signature 465 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g0888 537 SUPERFAMILY Cytochrome P450 51 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g0888 537 PANTHER CYTOCHROME P450 82C3-RELATED 13 535 - -
Amo19g0888 537 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 467 476 IPR017972 GO:0005506|GO:0016705
Amo19g0888 537 Gene3D Cytochrome P450 37 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0888 Amo-Chr19 14584192 14587235 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0888 48 534 Cytochrome P450 AT4G31970 47.059 1.16e-156 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0888 K17961 - gmx:100787489 710.294