Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0852 ATGGTGAAGCTCAATTTTGTTGTGCGTAGTGTGGTGATCACTCTAGCATTCACGCTTTCTCTTTGTGATGCTAACGACGACGATGGTAATCCAAAATTTCATATTGTTTATTTGGGCTCAATACCTGAAACAAAAGCTTCTTATTCTCCCACCTCTCACCATCTTAATATGCTGCAACAAGTTCTTGATGGTAGCAACCCAACAAAATCCTTAGTCCGTAGCTACAAGAGGAGCTTTAACGGTTTTGCTGCCATGCTCACGAATCAGCAAGCGGCAAAGTTAACCGAAATGGAAGGTGTTGTTTCAGTTTTCCCAAGCAAGACTCTCCAAACCCAAACCACAAGATCTTGGGATTTCTTGGGACTTCCAAAGGCACCAAAAGGGCATCAAACAGTAGAAACTAATCTCGTTGTRGGATTRCTCGACACCGGYGTTTGGCCGGAATCGYAAAGCTTCAGCGACAAAGGTATCAYAGYGCCTGTTCCGAAACATTGGAAGGGTARATGTGCAGGSGGCTTGAACTTCACATGCAACAAGAAGTTAATCGGAGCAAGATTCTACGTAGAGAACTCTGCCAGAGACAACAATGGCCATGGAAGCCACACAGCATCAACAGCAGCCGGAAAAACCGTTGACAATGGCGGCTTTTATGGAATTGCAGGAGGCACAGCGAGAGGAGCAGTTCCTTCTTCAAGAATCGCTGCTTACAAAGTATGCAGCTCTGCAGGCTGTGAAGACCACGACATCTTAGCTGCCTTTGATGACGCAATTGCTGACGGAGTTGACGTCATCTCCGTTTCACTTTCTGGGACCATTGCCCTACGCCTTGACACAGATTCAATTGCCATCGGTTCATTTCATGCAATGGCCAAAGGAGTAGTTGTAGTCCAATCTGCTGGAAATTATGGTCCTTTACCTGGCACCGTAGCAAGCGTTGCGCCATGGGTGATAACCTTCGCAGCAAACACCATAGATCGGAAAATCGTTGACAAGGTCGTTCTTGGAAATGGAAAAGCGTTGACCGGGATCCCGGTTATTAATCCTTTCGAGCCAAAGAGAAGAACAATTCCTATAGCTTTGAGCAACGGCAATACAAGGAGTTGTTTTGAAAAATTCGATGATCAATGTGCATGCTTGGATGAAAAATCGGTGAAAGGAAAGATAATTTTGTGTGAATATTATCTAGAAAAAGATGTACTCTTTTCTGGTGCAGCTGGTGCAATTGGAAAAGCATCTGATCTTGATAACGTGGCTTCTAATACTCTAATGCCTTCAGTGACATTGCTGCAAAAAGATTATGCCATTGTTAAATCCTATAAAAACTCAACAAAAAATCCAAGAGCTAAGATACTCAAGAGTGAGAGCGCTCAAGATCGTAATGCTCCTAAAGTGGTAGCATTTTCTGGCCGTGGACCAAACCCTACAATTTCAGAGATCTTGAAACCTGATATAAGTGCCCCAGGGGTTAATATCTTGGCTGCTTSTTCGCCAATTGGTTCACCAACAGYAGATCCTAGTACGGATAATAGATCTGTACATTACAATATTCTAAGRGGAACTTCAATGTCTTGTCCTCATGTTTCTGGAATAGCCGCATATGTGAAAAGTTTTCACCCTCATTGGTCACCTGCYGCAATTAAATCTGCTATTATGACGTCAGCAAAACCCATGGTTAGGAGTTCGGTGGAAGATGTGGGAGAATATGCATATGGATCTGGACAAGCCAATCCAATMCTWYCAATCAACCCTGGACTAGTTTATGACATTAACAAGGAGGATTATGTGCAAATGCTGTGTAACTTYGGGTATKATAATCGCACAATTAAAGTGATATCTGGAGAGRTGAATCCGTGCAAGGGAGCTGCACATCGATCATTGGTAAGAAATTTAAATTATCCAACTTTTGCAGCTCATGTTCGGCCCATGGTGCCTTTTAATGTCAGGTTTGGTAGAATTGTTACAAATGTTGGTTTAGCCAACTCAAGTTATAGCGTAACAGTCACACCGAATCCACAAGTTAATATCACGGTGACACCAAGGGTTTTGTCCTTCAAAGCATTAAACGAGAAAAAATCATTTGTAGTGAAGGTTGTTGGTAAGATACCAAATGAAACTGTGGTTATCTCATCCATAATATGGTCAGATGGGACCCATCATGTTCGAAGCCCAATTGTTATAGATGTCTCGGTACCATGA 2196 0.424 MVKLNFVVRSVVITLAFTLSLCDANDDDGNPKFHIVYLGSIPETKASYSPTSHHLNMLQQVLDGSNPTKSLVRSYKRSFNGFAAMLTNQQAAKLTEMEGVVSVFPSKTLQTQTTRSWDFLGLPKAPKGHQTVETNLVVGLLDTGVWPESXSFSDKGIXXPVPKHWKGXCAGGLNFTCNKKLIGARFYVENSARDNNGHGSHTASTAAGKTVDNGGFYGIAGGTARGAVPSSRIAAYKVCSSAGCEDHDILAAFDDAIADGVDVISVSLSGTIALRLDTDSIAIGSFHAMAKGVVVVQSAGNYGPLPGTVASVAPWVITFAANTIDRKIVDKVVLGNGKALTGIPVINPFEPKRRTIPIALSNGNTRSCFEKFDDQCACLDEKSVKGKIILCEYYLEKDVLFSGAAGAIGKASDLDNVASNTLMPSVTLLQKDYAIVKSYKNSTKNPRAKILKSESAQDRNAPKVVAFSGRGPNPTISEILKPDISAPGVNILAAXSPIGSPTXDPSTDNRSVHYNILRGTSMSCPHVSGIAAYVKSFHPHWSPAAIKSAIMTSAKPMVRSSVEDVGEYAYGSGQANPILXINPGLVYDINKEDYVQMLCNFGYXNRTIKVISGEXNPCKGAAHRSLVRNLNYPTFAAHVRPMVPFNVRFGRIVTNVGLANSSYSVTVTPNPQVNITVTPRVLSFKALNEKKSFVVKVVGKIPNETVVISSIIWSDGTHHVRSPIVIDVSVP* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0852 731 ProSitePatterns Serine proteases, subtilase family, serine active site. 519 529 IPR023828 -
Amo19g0852 731 CDD Peptidases_S8_3 109 554 IPR034197 -
Amo19g0852 731 Pfam Fibronectin type-III domain 629 726 IPR041469 -
Amo19g0852 731 Gene3D Peptidase S8/S53 domain 136 594 IPR036852 GO:0004252|GO:0006508
Amo19g0852 731 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 33 728 - -
Amo19g0852 731 Pfam Peptidase inhibitor I9 34 111 IPR010259 -
Amo19g0852 731 Gene3D - 325 457 - -
Amo19g0852 731 CDD PA_subtilisin_like 332 450 - -
Amo19g0852 731 Pfam Subtilase family 135 559 IPR000209 GO:0006508|GO:0008236
Amo19g0852 731 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 111 IPR037045 -
Amo19g0852 731 SUPERFAMILY Subtilisin-like 114 577 IPR036852 GO:0004252|GO:0006508
Amo19g0852 731 ProSiteProfiles Serine proteases, subtilase domain profile. 116 585 - -
Amo19g0852 731 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 728 IPR045051 -
Amo19g0852 731 Gene3D - 598 729 - -
Amo19g0852 731 PRINTS Subtilisin serine protease family (S8) signature 194 207 IPR015500 -
Amo19g0852 731 PRINTS Subtilisin serine protease family (S8) signature 518 534 IPR015500 -
Amo19g0852 731 PRINTS Subtilisin serine protease family (S8) signature 133 152 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0852 Amo-Chr19 13883146 13885341 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0852 38 725 Subtilisin-like Serine Gene Family AT5G59190 51.862 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0852 - - lang:109341651 743.036