Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0839 ATGTCAATGGGTGTTCATGGATTGGATCCGATTCGTATCTCCGTAACAAGAAGAGAAATTGCCCTGATTCAACATGCATCATATTGTCAAACTTTAAGTTGCACATTTCCAAAGTGTTTGAGGGTGAGGAAACTTATCAGGCATAAGGAAGATTGTATGATTGGTATTGATGAAGGAGATTGTTCGGAATGCATGGAAATTTGGGATTTGCTTAAGCTTCATGCTAAATATTGCAACACATCAGATCCTGAGTGTGAACTAATTTTTTAA 270 0.3704 MSMGVHGLDPIRISVTRREIALIQHASYCQTLSCTFPKCLRVRKLIRHKEDCMIGIDEGDCSECMEIWDLLKLHAKYCNTSDPECELIF* 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0839 89 Pfam TAZ zinc finger 18 86 IPR000197 -
Amo19g0839 89 ProSiteProfiles Zinc finger TAZ-type profile. 9 88 IPR000197 -
Amo19g0839 89 Gene3D TAZ domain 10 89 IPR035898 -
Amo19g0839 89 SUPERFAMILY TAZ domain 17 86 IPR035898 -
Amo19g0839 89 SMART TAZ_2 10 86 IPR000197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0839 Amo-Chr19 13715776 13717088 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Amo19g0839 zf-TAZ 6.8e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0839 - K04498 aip:107617072 156.377