Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0834 ATGGGTATTTCCAGGGATTCTATGCACAAGAGGCGCGCCACTGGTGGCAAGAAGAAGGTTTGGAGGAAGAAGAGGAAGTATGAGCTTGGACGCCAGCCAGCCAACACTAAGCTATCGAGCAATAAGACGGTCAGGAGGATTCGTGTTAGAGGTGGCAATGTGAAGTGGAGGGCATTGAGGTTGGATACCGGAAACTATTCATGGGGAAGTGAAGCTGTGACTCGCAAGACTCGTATTCTTGATGTTGTTTACAATGCCTCAAACAATGAGCTCGTGCGAACTCAGACTCTTGTCAAGAGTGCCATTGTTCAGGTTGATGCTGCCCCATTCAAGCAGTGGTACCTTCAGCATTATGGTGTTGATATTGGCAGGAAGAAGAAAACGGCTGCTGCCAAGAAGGATGCTGAGGAAGGTGAGACCCCTGCGGAGGAAGCCAAGAAAAGCAACCATGTGCAGAGAAAAATCGAGAAACGTCAGAAAGATCGTAAGCTTGATCCCCATATTGAAGAGCAGTTTGGTGGTGGGAGATTGCTGGCTTGCATTGCTTCTCGACCTGGTCAATGTGGCAGGGCTGACGGCTATATTTTGGAAGGTAAGGAGCTTGAATTTTACATGAAGAAAATCCAGAAGAAAAAGGGAAAGGGTGCTGCCTAA 654 0.4801 MGISRDSMHKRRATGGKKKVWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKTAAAKKDAEEGETPAEEAKKSNHVQRKIEKRQKDRKLDPHIEEQFGGGRLLACIASRPGQCGRADGYILEGKELEFYMKKIQKKKGKGAA* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0834 217 MobiDBLite consensus disorder prediction 131 167 - -
Amo19g0834 217 PANTHER 40S RIBOSOMAL PROTEIN S8 1 217 IPR001047 GO:0003735|GO:0005840|GO:0006412
Amo19g0834 217 ProSitePatterns Ribosomal protein S8e signature. 11 30 IPR018283 GO:0003735|GO:0005840|GO:0006412
Amo19g0834 217 Gene3D - 25 212 - -
Amo19g0834 217 TIGRFAM eS8: ribosomal protein eS8 1 198 IPR001047 GO:0003735|GO:0005840|GO:0006412
Amo19g0834 217 CDD Ribosomal_S8e_like 5 196 - -
Amo19g0834 217 MobiDBLite consensus disorder prediction 1 22 - -
Amo19g0834 217 Pfam Ribosomal protein S8e 5 196 IPR022309 -
Amo19g0834 217 PANTHER 40S RIBOSOMAL PROTEIN S8 1 217 - -
Amo19g0834 217 Gene3D Ribosomal protein S8e, subdomain 108 175 IPR042563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0834 Amo-Chr19 13696849 13699584 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0834 1 205 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 85.366 9.36e-128 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0834 K02995 - rcu:8277586 374.785