Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0819 ATGCATGTTGGTGCTGTGAAACATGGTGACAAAGCCATTGTTATTGATGATTTGGTGGCTACAGGTGGAACTCTATCTGCAGCAATTACTCTCTTAATGTGCTACAGAAAAGTGTTGGAGAGTACTGCTTCCACCACTGCAAAGCAGCACCTGTTGTCATCGTTCCTGAAAAAGATGCTGGGGATGCATCAATATTATAGTGAAGCTTTGTACGTATGTCAATTGGCCTTGTTAATATATCTAACAGTCATGTTTAGTGAAATGAAGATTGGTTCTGACTCATTTTCACCAAGAATAGAGATGTTTTCCTTGCATATATTTACATGTTAA 330 0.3848 MHVGAVKHGDKAIVIDDLVATGGTLSAAITLLMCYRKVLESTASTTAKQHLLSSFLKKMLGMHQYYSEALYVCQLALLIYLTVMFSEMKIGSDSFSPRIEMFSLHIFTC* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0819 109 CDD PRTases_typeI 1 32 IPR000836 -
Amo19g0819 109 Gene3D - 1 50 IPR029057 -
Amo19g0819 109 SUPERFAMILY PRTase-like 1 33 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0819 Amo-Chr19 13077501 13078705 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0819 1 32 PRT Gene Family AT1G27450 75.000 6.79e-11 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0819 K00759 - rcu:8282359 58.9214