Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0785 TTTTGTTCCTCAACCGTATATCCTAGTCATGGAATCCAGTTCGTTCGTAATGATGCCAAGATTTTTCGATTTTGTATATCTAAATGCCATAAGAACTTTAAAATGAAGAGGAATCCTCGTAAGGATTCAACGTTTGAATTCGAGAGAAAGCGGAACAAACCTGAGAGATATGACAGGAACCTTACTGAGAATGTGTTTAAGGCCATTCCTAAGATTGATAAAATCAGAGTCACCAGAGAGGAGAAACACCATAAGAATAGGATAAACCACAAAAAATATACTCGAATTATTTTGACACTGGCAAAAATATTTTTGAAATTTATTATCGTCAAAAATATTCTCAAATGA 348 0.3362 FCSSTVYPSHGIQFVRNDAKIFRFCISKCHKNFKMKRNPRKDSTFEFERKRNKPERYDRNLTENVFKAIPKIDKIRVTREEKHHKNRINHKKYTRIILTLAKIFLKFIIVKNILK* 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0785 115 PANTHER BNAA04G10330D PROTEIN 1 93 - -
Amo19g0785 115 CDD Ribosomal_L24e_L24 1 41 IPR000988 -
Amo19g0785 115 Pfam Ribosomal protein L24e 1 50 IPR000988 -
Amo19g0785 115 SMART 4TRASH 1 37 IPR011017 -
Amo19g0785 115 PANTHER 60S RIBOSOMAL PROTEIN L24 1 93 IPR000988 -
Amo19g0785 115 Gene3D Ribosomal protein L24e 1 43 IPR038630 -
Amo19g0785 115 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 1 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0785 Amo-Chr19 12369085 12370884 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0785 1 96 Cytoplasmic Ribosomal Protein Gene Family AT2G44860 62.832 9.80e-45 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0785 K02896 - gmx:100793564 169.474