Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0758 ATGGACGAGGACCAAGAGATGGAGAGGTTCGAAATGGACAACGATTTCGAAGAAGGCCAGTGGATTAACGGCGAATTCTACTACAAAAAGCGCAAAGAAAAGCGTACTCAGACCAGAGACGATGTCCTCTACGGTGTTTTTGCCGGCTCCGACGATGACGACGACGACGATTATTCTAGCAAGAAACTTAGGAAGGACCTTTCCAAGAAGCAGGACCTCACCAAGCCGGTAAATTTTATTTCTACTGGAACTTTTATGCCGAATCAAGATGTTGTTGATAACAATAGAGATTCTAAAGAACATTGTAAGAAAGATGGTTATGTTAGTGAGGATAGGCCAGGTTTAGGTCTTGGAATGGGATCTGCTTCCACTTCAGGTGCTGGTTTAGGGTTTAATAGTAGTAATGGTGATAGGAATAATGGTTCTGATGAGAACATTGATGATGGTGATGATCATAATTTTTTGCCTACGGCTTTTGGGAAGAAGATTAAGGAAGGGGCGATGCGGAGGGAGAGGGAAAGGGAGAGGGAGAAATTGGAGAAGAAGAGGGGTCAGCGTCAGAGTTCGGATCAAGATGGGTTTGGTAATGCGGGGAAATTCTATAACAATGGAATAGGGATGAAGCTGTTGGAAAAGATGGGTTATAGAGGGGGCGGTCTTGGAAAGAATGAGCAAGGTATTGTGGCTCCTATCGAGGTCAAAATGAGGGCTAAGAATTCAGGTATTGGTTTTAGTGATGCAAGGGAGGCGCCGCCACCACCATTGCCTGTTTTGCAGCAACAGAACAAAAGCACGGTGGGAGCAGTGCAGCCTGCGGCTAGCAGAACAAAGGAGAGGCTGTGGTCAAAGCAGTCACGGTTGAAGAAGAAGAAGAAAGAGGAGGAAGTGTATGTTACTGCTGAGGAGTTGTTGGCAAGCAAGCAAGAACAGAATTTGGAGGTTGTTCAGAAGGTTTATGATATGAGGGGGCCACAAGTTCGGGTTTATACAAATTTATCTGATTTAAATGCTGAGGAGAAAGCAAAGGAGGAGGATGTCCCAATGCCGGAACTTCAGCATAACATTGGATTGCTTGTTCGGTTGGCTGAGGCTGACATTCAAGAGATTGATAGAGATTTGAGGAGAGAAAGGGAGACAGCTCTCAGCTTGAAAAAAGAAAAAGACAAGTTAGAATCTGAAGCAGCATTCCAAAAGCGTCAACTGGATAATATGGAGGAAATAATGAGTGTCTTGGACCAAGTAGACGAAGAGAGCACTTCAGGAACGCTAACATTAGATTTCCTTGCCACATGCTTCAGTGACTTGCATAAGAGATATGCCGATAGCTACAAGTTGTGTAATTTGTCCTGCATTGCTTGCTCATATGCTCTTCCTTTGTTTATTACAGTGTTCCAAGGTTGGGATCCTCTTCGAAATCCATCTCATGGGTTGGAGTTGGTATCTACGTGGAAGACTGTCTTTGATGCTGTAAGCTGGGAACAACTTATGCTTCAATTTATTGTGCCTAAGTTGCAACTTGTCTTGCAAGAGTTTGAAGTCAATCCAGCAAGTCAGAAGCTCGATCAATTTTTTTGGGTAATTAAATGGGCTTCTGTGATTCCAATCCATATCATGGTGGACATGATGGAGAAGTTCTTCTTCCCAAAGTGGCTTGAGGTTTTGAATCACTGGTTGTGCTCAAATCCTAACTTTGAAGAAGTTATGAAGTGGTATAATGGATGGAAGGAGCTTATTCCAGAAGAACTATTGGCAAATGAAAGTATCCGATTCCAGATTAACCGTGGTTTAGATATGATGAGTCAGGCTGTTGACGGAATGGAGGTTTTCCAACCTGGTTTGAAGGAGCAACGACAATATGAGGCTCAGCAGAAAGCAGCAACCTATGCTCAACAGCAAGCTGCTGCAGCATTGGGTGGTGCCAACGCAGATGGTGTGCATGATTTGAGCTTGAAAGAGGTCATTGAGGCTCATGCCCAGCATCATGGTTTGTTGTTCAAGATTAAGCCTGGTAGAATGCACAACGGTTACCAAATATATGGGTTTGGTAATGTCAGCATAATAATAGACTCGCTACATCAGAAGGTATATGCTCAACATGAGGAAACATGGTCCTTGGAATCTCTTCAAGGATTGCTAGAGTTGCATAATAAATCCCTTGGTAAAAGACACTGA 2172 0.4355 MDEDQEMERFEMDNDFEEGQWINGEFYYKKRKEKRTQTRDDVLYGVFAGSDDDDDDDYSSKKLRKDLSKKQDLTKPVNFISTGTFMPNQDVVDNNRDSKEHCKKDGYVSEDRPGLGLGMGSASTSGAGLGFNSSNGDRNNGSDENIDDGDDHNFLPTAFGKKIKEGAMRREREREREKLEKKRGQRQSSDQDGFGNAGKFYNNGIGMKLLEKMGYRGGGLGKNEQGIVAPIEVKMRAKNSGIGFSDAREAPPPPLPVLQQQNKSTVGAVQPAASRTKERLWSKQSRLKKKKKEEEVYVTAEELLASKQEQNLEVVQKVYDMRGPQVRVYTNLSDLNAEEKAKEEDVPMPELQHNIGLLVRLAEADIQEIDRDLRRERETALSLKKEKDKLESEAAFQKRQLDNMEEIMSVLDQVDEESTSGTLTLDFLATCFSDLHKRYADSYKLCNLSCIACSYALPLFITVFQGWDPLRNPSHGLELVSTWKTVFDAVSWEQLMLQFIVPKLQLVLQEFEVNPASQKLDQFFWVIKWASVIPIHIMVDMMEKFFFPKWLEVLNHWLCSNPNFEEVMKWYNGWKELIPEELLANESIRFQINRGLDMMSQAVDGMEVFQPGLKEQRQYEAQQKAATYAQQQAAAALGGANADGVHDLSLKEVIEAHAQHHGLLFKIKPGRMHNGYQIYGFGNVSIIIDSLHQKVYAQHEETWSLESLQGLLELHNKSLGKRH* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0758 723 MobiDBLite consensus disorder prediction 32 198 - -
Amo19g0758 723 Coils Coil 359 407 - -
Amo19g0758 723 MobiDBLite consensus disorder prediction 74 92 - -
Amo19g0758 723 MobiDBLite consensus disorder prediction 93 110 - -
Amo19g0758 723 Pfam Tuftelin interacting protein N terminal 4 101 IPR022159 -
Amo19g0758 723 PANTHER TUFTELIN-INTERACTING PROTEIN 11-RELATED 7 484 IPR045211 GO:0000390
Amo19g0758 723 PANTHER TUFTELIN-INTERACTING PROTEIN 11-RELATED 479 709 IPR045211 GO:0000390
Amo19g0758 723 MobiDBLite consensus disorder prediction 125 140 - -
Amo19g0758 723 Coils Coil 290 310 - -
Amo19g0758 723 MobiDBLite consensus disorder prediction 141 188 - -
Amo19g0758 723 Pfam GC-rich sequence DNA-binding factor-like protein 428 484 IPR022783 -
Amo19g0758 723 Pfam GC-rich sequence DNA-binding factor-like protein 479 554 IPR022783 -
Amo19g0758 723 Pfam G-patch domain 203 243 IPR000467 GO:0003676
Amo19g0758 723 MobiDBLite consensus disorder prediction 55 72 - -
Amo19g0758 723 MobiDBLite consensus disorder prediction 255 285 - -
Amo19g0758 723 SMART G-patch_5 200 245 IPR000467 GO:0003676
Amo19g0758 723 ProSiteProfiles G-patch domain profile. 202 247 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0758 Amo-Chr19 11942849 11945750 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0758 199 243 C2H2 Transcription Factor Family AT5G26610 46.667 3.76e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0758 K13103 - cpap:110815980 747.658