Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0739 ATGGATTCCTTCATCTTCTTCCTTATCTCCATTGTTATCTCCTTGTGCTTCTGCTTCACCCTTCAAGCCCATGTCTTACCTTCTTCAAACTCCAACAATCCATTCCCCGAAGAAGCTCACCCCACCAAATCTGGTTACCTTCCAGTAGCTACCACGTCTTCTTCTGCAATCTTCTATGCTTTATATGAAGCTCAAAACTCAACCTTACCTCTCTCCAGAACCCCACTTCTCATTTGGCTCCAAGGTGGCCCTGGAACCTCCTCCATGCTTGGCAACCTCTATGCGGTTGGACCATGGCGTATCACAGAATCCATCACCCTTGAACCCAACCCTGGTGCTTGGAACAGGTTCTTTGGCGTTCTCTTTCTTGATAACCCCATTGGCACTGGATTCAGTATAGCCTCATCACCTCAAGAGATCCCAACAAATCAAGAAGGTATTTCCAAACACCTTTATGTTGCTATTACAACGTTTCTTCGACTTGATCCTGTTTACAAACACCGCCCTATTTATATTGTTGGCCAAAGTTATGGAGGAAAGTATGCGTCTACAACTGGAAATTACATATTGAAAAGAAATGCACAGTTGCATGCTTCTAAAAGAGTGAATCTTGTTGGTGTGGCTATCGGGAATGGAATAATTGAGGCAGTGACCCAATCACGCACGCTTCCGGCTAATGCTTATTATGTGGGTCTGATCAATGAGAGGCAAAAAAGTGAGTTGGAGAAGACTGCAGGGGGAAGACTCCAGGGGAAGTTGCAAAACATGTCAGGGCTGGCTACTTTGTATGATTACACAAGGAAAGATCATCTTTATCACTATCAAGATTGGATTAATCAATTCATGAATATAGCTGAAGTGAAGAAGGCATTGGGAGTGAACGAATCACAAGTCTTTAAAGTGTCCAGTAATGATATTAGAGCAGCGTTCCGAGGTGATATAATGAAGAGTGTCAAGTTTAGGGTAGAAGGGTTGTTGAGGAGCAATGCTATTAGGGTGTTGTTGTACCAAGGTCAATATGATTTGATTGCTGGTCCGGTGCAAACTGAGGCATGGGTGAATACTATGAAATGGGAAGGGATTGTGGAGTATGTGAATGCAGAGAGGAAGATATGGAAGGTGAATGGAGAGCTTGCTGGGTATGTCCAACAATGGAAGTCACTCACCAATGTTGTGGTCTTGGGTGCTGGCCATCTTATGCCTGCTGACCAGCCTTTGAATGCTAAAGCAATGATTGAAGATTGGGTCTTGCAAAAGGGTATATTTGGAAATTCGCCTTCTTTTAAGTTTTGA 1293 0.4354 MDSFIFFLISIVISLCFCFTLQAHVLPSSNSNNPFPEEAHPTKSGYLPVATTSSSAIFYALYEAQNSTLPLSRTPLLIWLQGGPGTSSMLGNLYAVGPWRITESITLEPNPGAWNRFFGVLFLDNPIGTGFSIASSPQEIPTNQEGISKHLYVAITTFLRLDPVYKHRPIYIVGQSYGGKYASTTGNYILKRNAQLHASKRVNLVGVAIGNGIIEAVTQSRTLPANAYYVGLINERQKSELEKTAGGRLQGKLQNMSGLATLYDYTRKDHLYHYQDWINQFMNIAEVKKALGVNESQVFKVSSNDIRAAFRGDIMKSVKFRVEGLLRSNAIRVLLYQGQYDLIAGPVQTEAWVNTMKWEGIVEYVNAERKIWKVNGELAGYVQQWKSLTNVVVLGAGHLMPADQPLNAKAMIEDWVLQKGIFGNSPSFKF* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0739 430 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 25 421 IPR001563 GO:0004185|GO:0006508
Amo19g0739 430 Pfam Serine carboxypeptidase 267 416 IPR001563 GO:0004185|GO:0006508
Amo19g0739 430 Pfam Serine carboxypeptidase 41 248 IPR001563 GO:0004185|GO:0006508
Amo19g0739 430 SUPERFAMILY alpha/beta-Hydrolases 41 418 IPR029058 -
Amo19g0739 430 PANTHER CARBOXYPEPTIDASE 25 421 - -
Amo19g0739 430 Gene3D alpha/beta hydrolase 19 423 IPR029058 -
Amo19g0739 430 PRINTS Carboxypeptidase C serine protease (S10) family signature 158 183 IPR001563 GO:0004185|GO:0006508
Amo19g0739 430 PRINTS Carboxypeptidase C serine protease (S10) family signature 110 122 IPR001563 GO:0004185|GO:0006508
Amo19g0739 430 PRINTS Carboxypeptidase C serine protease (S10) family signature 388 401 IPR001563 GO:0004185|GO:0006508
Amo19g0739 430 PRINTS Carboxypeptidase C serine protease (S10) family signature 123 133 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0739 Amo-Chr19 11485686 11486978 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0739 281 416 Calmodulin-binding Proteins AT2G22960 22.628 7.72e-08 50.4