Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0720 ATGGCAAGAATCATAGGTTCCTATAGTGTGACACCAAAAAAAGAAACTCCGAATGGTGTCTTATGGTTAGCAGAGAATGACCAAGTCCCACGTTGGAGTCACCAACCGACACTCTACATTTTTACAAGCCAAAACATTCAGAATCCGAAGATGATTTCAATCCACATCTTGGTTCATTATTATCCCTTAGCTTGCAGGTTGAATTGGATCCAAGGTGATCGTTTGAAACTGGATTGTAACGCAAAAGGAGCCATGCTTCTTGAAGCCCAATCCAACAAATCAATGGCTGAATATGGAGACTTCTCACCAAATCAGCCAATCAAGGAACTCATCCCAACCGTTGATTATTCTCGCCCCATAGAGGAGCTTCCTTTGTTGCTCGCACAGATCACAAGGTTCAAAGAATTACAAGAAGGCATCGCCATTGGAATCGCTTTGTCTCATCCCTTATGTGATGGCCTTGCAGGCATTCACTTCATCAACTCATGGGCAAAGTCCAAAAAACTGAAGAAAGATGCCAATAATGATAATAACGGCTTCCAATCTGGGGAGCCTTATAGCAGATTTGAAGCCATTGGAGCACATCTATGGAGATCTGCTTGTAAGGCTCGTGAGCTTAGCAAACATCAACCAACTGTATTCCAGACGGTGGTTGATATTCGCAAGAAGCTGAATCCTCCTCTGCCTCAAAACTATTTTGGAAACGCTTTAGCTTTCACGAGTCGGAGAGATCGTGTCAAAGCCGCTGAGTTATGCTGCAAAGAACATAAGGGAAGCAGTGGAAAGAATTAA 792 0.4318 MARIIGSYSVTPKKETPNGVLWLAENDQVPRWSHQPTLYIFTSQNIQNPKMISIHILVHYYPLACRLNWIQGDRLKLDCNAKGAMLLEAQSNKSMAEYGDFSPNQPIKELIPTVDYSRPIEELPLLLAQITRFKELQEGIAIGIALSHPLCDGLAGIHFINSWAKSKKLKKDANNDNNGFQSGEPYSRFEAIGAHLWRSACKARELSKHQPTVFQTVVDIRKKLNPPLPQNYFGNALAFTSRRDRVKAAELCCKEHKGSSGKN* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0720 263 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 5 166 - -
Amo19g0720 263 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 167 241 - -
Amo19g0720 263 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 5 166 - -
Amo19g0720 263 Gene3D - 2 188 IPR023213 -
Amo19g0720 263 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 167 241 - -
Amo19g0720 263 Pfam Transferase family 4 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0720 Amo-Chr19 11142041 11144377 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0720 169 262 Monolignol Biosynthesis Gene Families AT5G48930 36.170 1.60e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0720 K13065 - gmx:100787038 190.274