Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0719 ATGGATCGAATTAGGACTCCTTTCTTGGAAAAAGGAGAGTATAGAGAAGATGTGTTATTCTATGGGAATCCAAACTTTGGAGTTACAACAAGCTGGATGAGCATGGCGGTGTATGAAGCTGATTTTAGTTGGGGAAGGTTGGTTCACTTTGGTCAAGGTGCTTTGTTTCCCTTTGATAGGGGATTGTTGGCTCTAAGCCCAGACATGGATGGATCTATTCTTGTCTTCATGCATTTTCAGGAAGCTAACATGCAAAATTTCATCAAGTTCTTTTGGGAAGATATTTGA 288 0.4028 MDRIRTPFLEKGEYREDVLFYGNPNFGVTTSWMSMAVYEADFSWGRLVHFGQGALFPFDRGLLALSPDMDGSILVFMHFQEANMQNFIKFFWEDI* 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0719 95 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 8 95 - -
Amo19g0719 95 Pfam Transferase family 21 88 - -
Amo19g0719 95 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 95 - -
Amo19g0719 95 Gene3D - 5 94 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0719 Amo-Chr19 11141704 11141991 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0719 21 93 Monolignol Biosynthesis Gene Families AT5G48930 38.356 6.87e-11 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0719 K13065 - aip:107646786 104.375