Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0718 ATGGAGTTGGAAGCTGAACTGGTAACTGCTAACGAAAGTTCTGCTGAAAAAACAGTAGGACCATGTGTGGGCGCTTCAATTTTGGAACCATATATTGGTATGGAATTTGATTCTGAAGCTGATGCCAAGAACTTTTATGATGAATATGCAAGACAGGAAGGGTTTATTGTGCGCATTGATAAATGTCATCGTTCTGAAATTGACAACAGAATTATTTCTCGTCGTCTTACTTGCAATAAGGAAGGTTTTCATGTGAGAGGGAAAAATGATAAAGTCAACCCTTATCGGAAACCACGGGTTAGCATAAGAGAAGGCTGCGAGGCAATGATGATGGTCAAAGTTAATAAATGTGGGAAGTGGGTTGTTACTAAATTTGTAAAAGAACATAGTCATCCACTGATGGGTTCTGGTGTTCGTTCTTATCGTACAACAGAATCGAAGGATAAGAGAATTCGACAACTCACAAAGGAACTCGAGCGTCGAGATCAGCAATGTCAGCAATATCGCAAGCTGATACTTTCCCTTCTGGAAACTGTTGAGGAGCAAAATAAATTCTTATCAACGAAAGTTGAACATGTTGTTCAGTGTGTGAAACAACTTGAGAATGATGTGCAAAAACCTTTGGACACTAGCTAG 636 0.3947 MELEAELVTANESSAEKTVGPCVGASILEPYIGMEFDSEADAKNFYDEYARQEGFIVRIDKCHRSEIDNRIISRRLTCNKEGFHVRGKNDKVNPYRKPRVSIREGCEAMMMVKVNKCGKWVVTKFVKEHSHPLMGSGVRSYRTTESKDKRIRQLTKELERRDQQCQQYRKLILSLLETVEEQNKFLSTKVEHVVQCVKQLENDVQKPLDTS* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0718 211 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 8 208 - -
Amo19g0718 211 Pfam FAR1 DNA-binding domain 44 134 IPR004330 -
Amo19g0718 211 Coils Coil 151 171 - -
Amo19g0718 211 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 8 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0718 Amo-Chr19 11137017 11140204 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo19g0718 FAR1 1.5e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0718 - - pvu:PHAVU_010G032600g 258.455