Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0690 ATGGACGAGGATCAAGAGATGGAGAGGTTCGAAATGGACAACGATTTCGAAGAAGGCCAGTGGATTAACGGCGAATTCTACTACAAAAAGCGCAAAGAAAAGCGTACTCAGACCAGAGACGATGTCCTCTACGGTGTTTTTGCCGGCTCCGACGATGACGACGACGACGATTATTCTAGCAAGAAACTTAGGAAGGACCTTTCCAAGAAGCAGGACCTCACCAAGCCGGTAAATTTTATTTCTACTGGAACTTTTATGCCGAATCAAGATGTTGTTGATAACAATAGAGATTCTAAAGAACATGGTGAGAAAGATGGTTATGTTAGTGAGGATAGGCCAGGTTTAGGTCTTGGAATGGGATCTGCTTCCACTTCAGGTGCTGGTTTAGGGTTTACTAGTAGTAACGGTGATAGGAATAATGGTTCTGATGAGAACATTGATGATGGTGATGATCATAATTTTTTGCCTACGGCTTTTGGGAAGAAGATTAAGGAAGGGGCGATGCGGAGGGAGAGGGAAAGGGAGAGGGAGAAATTGGAGAAGAAGAGGGGTCAGCGTCAGAGTTCGGATCAAGATGGGTTTGGTAATGCGGGGAAATTCTATAACAATGGAATAGGGATGAAGCTGTTGGAAAAGATGGGTTATAGAGGGGGCGGTCTTGGAAAGAATGAGCAAGGTATTGTGGCTCCTATTGAGGTGAAAATGAGGGCTAAGAATTCAGGTATTGGTTTTAGTGATGCAAGGGAGGCGCCGCCACCACCGTTGCCTATTTTGCAGCAACAGAACAAAAGCACGGTGGGAGCAGTGCAGCCTGCGGCTAGCAGAACAAAGGAGAGGCTTTGGTCAAAGCAGTCACGGTTGAAGAAGAAGAAAGAGGAGGAAGTGTATGTTACTGCTGAGGAGTTGTTGGCAAGCAAGCAAGAACAGAATTTGGAGGTTGTTCAGAAGGTTTATGATATGAGGGGGCCACAAGTTCGGGTTTATACAAATTTATCTGATTTAAATGCCGAGGAGAAAGCAAAGGAGGAGGATGTCCCAATGCCGGAACTTCAGCATAACATTGGATTGATTGTTCGGTTGGCTGAGGCTGACATTCAAGAGATTGATAGAGATTTGAGGAGAGAAAGGGAGACAGCTCTCAGCTTGAAAAAAGAAAAAGAGAAGTTAGAATCTGAAGCAGCATTCCAAAAGCGTCAACTGGATAATATGGAGGAAATAATGAGGGTCTTGGACCAAGTAGCCGAAGAGAGCACTTCTGGAACCCTAACATTAGATTTCCTTGCTAGATGCTTCAGTGACTTGCATAAGAGATATGCTGATAGCTACAAGTTGTGTAATTTGTCCTGCATTGCTTGCTCATATGCTCTTCCTTTGTTTATTAGAGAGTTCCAATGCTGGGATCCTCTTCGAAATCCATCTCGTGGGTTGGAGTTGGTATCTACGTGGAAGACCTTGCTTCAAGGAGAAGAATGTCTTGATATATGGGATGTTTCATCACCTTATACACAATTGGTTTCGGAAGTTGTGTTGCCAGCCGTCAGAATATCTGGAATCAATACATGGCAGCCACGGGATCCTGAGCCAATGCTACGATTTCTTGATTTGTGGGAGAAGTTGCTTCCTCCTTCAGTCCTCACTGCCATATTGGACAATATAGTCTTGCCAAAATTGTCAGCTGCTGCAGATACTTGGGAACCACATCAAGAGACCATTCCTATCCACACTTGGGTGCATCCATGGCTACCAAGGATAGAGCACAAGTTGGAAGGCATTTACCAGGTCATTCGTTTTAAATTGAGTTCTGTTCTTGGTGCCTGGCATCCAAGTGACGCCTCTACATATACCATATTGTCTCCGTGGAAGACTGTCTTTGATGCTGTAAGCTGGGAACAACTTATGCTTCGATTTATTGTGCCTAAGTTGCAACTTGTCTTGCAAGAGTTTGAAGTCAATCCAGCAAGTCAGAAGCTCGATCAGTTTTTTTGGGTAATTAAATGGGCTTCTGTGATTCCAATTCATATCATGGTGGACATGATGGAGAAGTTCTTCTTCACAAAGTGGCTCCAGGTTTTGTATCACTGGTTGTGCTCAAATCCTAACTTTGAAGAAGTTATGAAGTGGTATAATGGATGGAAGGAGCTTATTCCAGAAGAACTATTGGCAAATGAAAGTATCCGATTCCAGATAAACCGTGGTTTAGATATGATGAGTCAAGCTGTTGATGGAATGGAGGTTGTCCAACCTGGTTTGAAGGAGAATATCAGCTATCTTCGGGTACGTGAGCAACGACAATTTGAGGCTCAACAGAAAGCAGCAACCTATGCTCAACAGCAAGCTGCTGCAGCATTGGGTGGTGCCAACGCAGATGGTGTGCATGATTTGAGCTTGAAAGAAGTCATTGAGGCTCATGCCCAGCATCATGGTTTGTTGTTCAAGATTAAGCCTGGTAGAATGCACAACGGTCACCAAATATATGGGTTTGGTAATGTCAGCATAATAATAGACTCGCTACATCAGAAGGTATATGCTCAACATGAGGAAACATGGTCCTTGGAATCTCTTCAAGGATTGCTGGAGTTGCATAATAAATCCCTTGGTAAAAGACACTGA 2610 0.4387 MDEDQEMERFEMDNDFEEGQWINGEFYYKKRKEKRTQTRDDVLYGVFAGSDDDDDDDYSSKKLRKDLSKKQDLTKPVNFISTGTFMPNQDVVDNNRDSKEHGEKDGYVSEDRPGLGLGMGSASTSGAGLGFTSSNGDRNNGSDENIDDGDDHNFLPTAFGKKIKEGAMRREREREREKLEKKRGQRQSSDQDGFGNAGKFYNNGIGMKLLEKMGYRGGGLGKNEQGIVAPIEVKMRAKNSGIGFSDAREAPPPPLPILQQQNKSTVGAVQPAASRTKERLWSKQSRLKKKKEEEVYVTAEELLASKQEQNLEVVQKVYDMRGPQVRVYTNLSDLNAEEKAKEEDVPMPELQHNIGLIVRLAEADIQEIDRDLRRERETALSLKKEKEKLESEAAFQKRQLDNMEEIMRVLDQVAEESTSGTLTLDFLARCFSDLHKRYADSYKLCNLSCIACSYALPLFIREFQCWDPLRNPSRGLELVSTWKTLLQGEECLDIWDVSSPYTQLVSEVVLPAVRISGINTWQPRDPEPMLRFLDLWEKLLPPSVLTAILDNIVLPKLSAAADTWEPHQETIPIHTWVHPWLPRIEHKLEGIYQVIRFKLSSVLGAWHPSDASTYTILSPWKTVFDAVSWEQLMLRFIVPKLQLVLQEFEVNPASQKLDQFFWVIKWASVIPIHIMVDMMEKFFFTKWLQVLYHWLCSNPNFEEVMKWYNGWKELIPEELLANESIRFQINRGLDMMSQAVDGMEVVQPGLKENISYLRVREQRQFEAQQKAATYAQQQAAAALGGANADGVHDLSLKEVIEAHAQHHGLLFKIKPGRMHNGHQIYGFGNVSIIIDSLHQKVYAQHEETWSLESLQGLLELHNKSLGKRH* 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0690 869 PANTHER TUFTELIN-INTERACTING PROTEIN 11 7 855 - -
Amo19g0690 869 MobiDBLite consensus disorder prediction 32 198 - -
Amo19g0690 869 MobiDBLite consensus disorder prediction 93 110 - -
Amo19g0690 869 MobiDBLite consensus disorder prediction 74 92 - -
Amo19g0690 869 MobiDBLite consensus disorder prediction 125 140 - -
Amo19g0690 869 MobiDBLite consensus disorder prediction 141 188 - -
Amo19g0690 869 Coils Coil 358 406 - -
Amo19g0690 869 PIRSF TFIP11 1 864 IPR024933 -
Amo19g0690 869 Pfam GC-rich sequence DNA-binding factor-like protein 425 691 IPR022783 -
Amo19g0690 869 MobiDBLite consensus disorder prediction 255 281 - -
Amo19g0690 869 Coils Coil 289 309 - -
Amo19g0690 869 Pfam Tuftelin interacting protein N terminal 4 102 IPR022159 -
Amo19g0690 869 MobiDBLite consensus disorder prediction 55 72 - -
Amo19g0690 869 Pfam G-patch domain 203 243 IPR000467 GO:0003676
Amo19g0690 869 PANTHER TUFTELIN-INTERACTING PROTEIN 11-RELATED 7 855 IPR045211 GO:0000390
Amo19g0690 869 SMART G-patch_5 200 245 IPR000467 GO:0003676
Amo19g0690 869 ProSiteProfiles G-patch domain profile. 202 247 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0690 Amo-Chr19 10771888 10775212 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0690 199 243 C2H2 Transcription Factor Family AT5G26610 46.667 5.27e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0690 K13103 - gmx:100781621 1329.69