Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0660 ATGAATAAAGCTATAGCATTAGTTGCTTCTTCATTCTTGATTTTGTTGTTGGCTTCTCCAACAGTTTTTGCAACAGATTACACTGTTGGAGATGCCTCTGGATGGACCCTTGAAGTTGATTACACCAAATGGGTTGCAGGGAAAGATTTCAAAGTTGGTGATACTCTAACATTCAAGTATTCCCCAAGCTTCCACCAACTGGACGAAGTGAGCGAAAGCGACTTCAATGGCTGCAATCCAAGCAAACCAATAAGAAATCACAGAGATGGCAACACCAAGATCACACTTTCGAAGGCAGGGCGCTTCTTCTTCTTCTGCCCAATCGGTAATCACTGCTCTCGCTCCATGAAACTTGCAGTCACTGTTCGTGCTTGA 375 0.4373 MNKAIALVASSFLILLLASPTVFATDYTVGDASGWTLEVDYTKWVAGKDFKVGDTLTFKYSPSFHQLDEVSESDFNGCNPSKPIRNHRDGNTKITLSKAGRFFFFCPIGNHCSRSMKLAVTVRA* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0660 124 PANTHER CUPREDOXIN SUPERFAMILY PROTEIN-RELATED 8 123 - -
Amo19g0660 124 Gene3D - 23 124 IPR008972 -
Amo19g0660 124 ProSiteProfiles Phytocyanin domain profile. 25 124 IPR003245 GO:0009055
Amo19g0660 124 PANTHER BLUE COPPER PROTEIN 8 123 IPR039391 GO:0009055
Amo19g0660 124 SUPERFAMILY Cupredoxins 23 122 IPR008972 -
Amo19g0660 124 CDD Phytocyanin 25 122 - -
Amo19g0660 124 Pfam Plastocyanin-like domain 35 115 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0660 Amo-Chr19 10170256 10171967 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0660 20 124 Miscellaneous Gene Families AT3G60270 51.429 2.50e-34 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0660 - - adu:110275339 147.902
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0660 19 10170256 10171967 Amo02g0448 02 5519607 5523713 hybridization