Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0659 ATGGTGGTAAATCATGTGAGGATAAGCAAAAAAAAAAAGCAAGAGGAAGCTTCTGCTTCTGAGAATCAATCACAATACCCGTTTCCGGAGCTTTCTTCTTCTGGTCGTCTTGAGGTGACGGTATTAACTAAACCTACTGTGGATGAACTCGGTCGAGTAATTGAGCAACTGCAGCCAGATTTTGTTTACCTACAAGGTAGACAGCTGGAAGAAAGCGGTGAAATTGGGTCTCTTATATGGGAAGAATTTGACCTGTCTAGTCCAGAAGCATTATGTGCATTGTTTTCTTCAAAATTACCTAATACTGTTTATTTGGAAACTCCTAAGGGAGAAAACTTGGCAGAGGCACTCCACTCTAAGGTCACATTGATAGCAGGCAATCTATAG 387 0.4109 MVVNHVRISKKKKQEEASASENQSQYPFPELSSSGRLEVTVLTKPTVDELGRVIEQLQPDFVYLQGRQLEESGEIGSLIWEEFDLSSPEALCALFSSKLPNTVYLETPKGENLAEALHSKVTLIAGNL* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0659 128 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 4 14 120 IPR042293 -
Amo19g0659 128 MobiDBLite consensus disorder prediction 1 31 - -
Amo19g0659 128 PANTHER ARID/BRIGHT DNA-BINDING DOMAIN PROTEIN 14 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0659 Amo-Chr19 10168083 10168674 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0659 14 120 ARID Transcription Factor Family AT3G43240 48.598 5.09e-28 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0659 - - aip:110267137 247.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0659 19 10168083 10168674 Amo02g0532 02 6551536 6558869 hybridization