Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0650 ATGCTCACATCAGAACCCGATCCCATTCTCACCGAGAAATCATGGCATCTCTTTTCCCTTCTTCTTCAAATCGGCCACCCCGTCCACCCTCAACTTCTCGCCTCCTACTGCAAGCTCTTCCCCACGTGCCCCGACTTCGTCAGGCACGTGAGTTCACTCCCTCGCTCCCCGATCTTACTCAATGCTAATGGACTCGTTACTCCTTCTGCCGACGCCGTTAGCGCCATTGGAAGGTTCGTAACTGTTTCCATTGACCGCCGTTTTCTGTTTCGGAACATTCCAGAATGTTCCGGCTGGTCCAAGAAACGGAAGGTGGCTACTGATGTGGTTAAGTTTCCTGCTGCTAAGAGGAGGTTGTTTTTCACTTCTGCCGGAGTGGTTGAAAGAGATCAGAGGAGATTAACAGTTGGCGATGGGGTTCTAGAAGTATCTTTGGAGAGTTATGCGCATGATGCAAAGATTATGACGAGAAACAACTTCCCTGCACTGAAATTTGAATCAGCAAATATGGATATTGAGAGTGCTATTATCCCTTTGCGCATCATTGAAAATGGGGAGTGTTTTGATTGTCCAGCACCAAATTTTTTCGTGACTGGTAATGATACCAGCACAATCACATTCCGGGCAGAGGTTTCTGGTCCTGTAACTAAAGCTGGTGATAGCTTGTTTATAAATGGAAGTGAGTTAACTTGTCAGAAGGAAACAGGTAGAGATTCATTCATGCAATCTAATATCTCTGTCAACCATGTTAAGTCAACTGGTTTCCAAGATACCTTACTTTGCAATGAGACCCTTGTTGACATTGAATTGGGAAAGAAAATGGACTACTTTGATGCACCAGGGAGTGAATTGGCTGAGCAAAATAATATTGGTACTGCAGATGATATTCGTAAAACCAATACAAGCAAAGATCCAATAAGTGAATCGAAGAATGAAGATGAAGGCTTGCAAGTGGAAATTGATCCAAAGAAAGGGGTGATTGGTTTTGGCATGGAGAAAGAAAAGGAAGATGTATTTGAGATGGGCCATATTGCACTTGTTGCAGAAGAACTAAAAAATGGTGTGGAACCAGAAAACCATGTATCTTTGTTAAATTTGGACAACAAAGAGTGTACAGTGAGAAACATGGTGACTTCAACTCCAAAGCAGCTTCTAAAATCTCCTTCCATATCAAAGGAAGGACAGAGGAATGATTTGCAACCAAAGTTACAAGTCCTCACAGAGTCACTAGCCTGTAACATATCTAATAAAACTCCAGAAGATGTTGATCAATGTAGAAATGATCAGACTCAGAAATGTCTTCAGAAGTACAAGCGAAAGCAAAACCGCAAGGAGAACCTAGTAGAAACTATCTCCATTACTCCTAAGGTGGAGAAAAAAGCACATCCATCTTTTGAAGCCTTTACAATAGAGGAAGAAGAAGGTTCAGGTGGTTATGGCACTGTTTACCGCGCCCGCAGAAAGACTGATGGAAAAAAACTTGCAATAAAATGTCCACATGATAATGCTCATAAAAACCATATACATAATGAGAGAATTATGCTTGAGCGTTTTGGGGGTAAAAGCTTCATAATAAAGTTTGAAGGTTCTTTCAAAAGTGGCAGCAGTGACTGCTTTGTTTTGGAACATGTTGAGCATGACAGACCCGAGGTTTTGAAAAGAGAAATTGATATAGTTCAGCTTCAGTGGTATGCATATTGCTTGTTCAGAGCCCTTGCCTGCTTACACAAGGAGGGAGTTGTTCATCGAGATGTTAAACCTGGAAACTTCCTCTTTTCTCGAAAGCTAAGCAAGGGCTACCTCATTGATTTCAACCTTGCCATGGATTTAAAGCAGAAGTACAACAGTGGAAGTAAATCAAAACTAGGCCTCGATACATCAAACAATGTGCCTGTACCATCTGGCTCCCGCCCATTGGCCCATGAAAAGAACAATGGAGGAAGGAAGTCCATGACATTCAACAAAAGGGAATTGGCAGATTATAAGAAAAATTCTGAACTTATTAATAGGCATGCAAAGCAGAAAGCTTATGCTGGTTCTCCGAAAAACTGTGTTGGTAAGACTGGTGGAAATTTACTTAGAGCACAAGGAACAGAGGGCTCGGGTATAACCTCGGCAAAAGATGTTACAAGCACTCGGACTGCTTCTGCAGAAAGGCTCAGGGAGCCCCTGCCTACCCAAGGAAGAAAAGGGCTTATCAGTTTTCTGCATAATTCTGTGCAATCTGCACGCAATAGCTCCATTAAAGGTCCGTCTTCCCAAAGGAAAAGAGTAACTGCTCCTTCAGGCAAGGTAGATGGCAAGATGGTTTATCTTACACCAATGCCTTTACATTCATCTGTTGCCGCTGGGTTATTGAGAAGCAAAGGAGATGGAAAACTCAAAAGAGAAGGTTCATGTGTCGGTACTAAGGGATTCCGTGCTCCCGAGGTTTTGCTTAAGTCTCAGTTTCAGGGACCAAAGGTTGATATTTGGTCAGCTGGAGTTACTTTGCTTTACATGGTGATTGGGAAGACTCCTTTCACTGGCGATCCAGAACAGAATATAAAAGACATTGCTAAGTTACGGGGCAGTGAAGAGCTTTGGGAAGTTGCAAAGCTACATGACCGTGAAATATCTTTTCCAATGGAGTTACTAGATGAACGGTACTTGCAAGCATGGGACATAGAAAAGTGGTGCAAGGTCAACACAAGGAGACCCGAGTTAGAAATCCCCAAATCATTGTTTGATCTAATAGATAAGTGTCTGACAGTGAATCCAAGAAATAGGGTCGGTGTTGAAGAAGCTTTAAGGCATGAGTTCTTTGCTTCATGCAATGAGACTATGAGAAAGGGAAGGATGATAAGAAGAGGTATCAGCTCAGATACTGCAGCTTCAAGCTCATTATGA 2889 0.4251 MLTSEPDPILTEKSWHLFSLLLQIGHPVHPQLLASYCKLFPTCPDFVRHVSSLPRSPILLNANGLVTPSADAVSAIGRFVTVSIDRRFLFRNIPECSGWSKKRKVATDVVKFPAAKRRLFFTSAGVVERDQRRLTVGDGVLEVSLESYAHDAKIMTRNNFPALKFESANMDIESAIIPLRIIENGECFDCPAPNFFVTGNDTSTITFRAEVSGPVTKAGDSLFINGSELTCQKETGRDSFMQSNISVNHVKSTGFQDTLLCNETLVDIELGKKMDYFDAPGSELAEQNNIGTADDIRKTNTSKDPISESKNEDEGLQVEIDPKKGVIGFGMEKEKEDVFEMGHIALVAEELKNGVEPENHVSLLNLDNKECTVRNMVTSTPKQLLKSPSISKEGQRNDLQPKLQVLTESLACNISNKTPEDVDQCRNDQTQKCLQKYKRKQNRKENLVETISITPKVEKKAHPSFEAFTIEEEEGSGGYGTVYRARRKTDGKKLAIKCPHDNAHKNHIHNERIMLERFGGKSFIIKFEGSFKSGSSDCFVLEHVEHDRPEVLKREIDIVQLQWYAYCLFRALACLHKEGVVHRDVKPGNFLFSRKLSKGYLIDFNLAMDLKQKYNSGSKSKLGLDTSNNVPVPSGSRPLAHEKNNGGRKSMTFNKRELADYKKNSELINRHAKQKAYAGSPKNCVGKTGGNLLRAQGTEGSGITSAKDVTSTRTASAERLREPLPTQGRKGLISFLHNSVQSARNSSIKGPSSQRKRVTAPSGKVDGKMVYLTPMPLHSSVAAGLLRSKGDGKLKREGSCVGTKGFRAPEVLLKSQFQGPKVDIWSAGVTLLYMVIGKTPFTGDPEQNIKDIAKLRGSEELWEVAKLHDREISFPMELLDERYLQAWDIEKWCKVNTRRPELEIPKSLFDLIDKCLTVNPRNRVGVEEALRHEFFASCNETMRKGRMIRRGISSDTAASSSL* 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0650 962 SUPERFAMILY Protein kinase-like (PK-like) 451 939 IPR011009 -
Amo19g0650 962 MobiDBLite consensus disorder prediction 696 717 - -
Amo19g0650 962 MobiDBLite consensus disorder prediction 297 314 - -
Amo19g0650 962 Gene3D Transferase(Phosphotransferase) domain 1 782 954 - -
Amo19g0650 962 Pfam Protein kinase domain 470 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g0650 962 Pfam Protein kinase domain 799 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g0650 962 MobiDBLite consensus disorder prediction 743 759 - -
Amo19g0650 962 MobiDBLite consensus disorder prediction 743 762 - -
Amo19g0650 962 MobiDBLite consensus disorder prediction 620 650 - -
Amo19g0650 962 PANTHER CASEIN KINASE-RELATED 439 941 - -
Amo19g0650 962 MobiDBLite consensus disorder prediction 620 634 - -
Amo19g0650 962 Gene3D Transferase(Phosphotransferase) domain 1 428 623 - -
Amo19g0650 962 SMART serkin_6 468 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g0650 962 ProSitePatterns Serine/Threonine protein kinases active-site signature. 580 592 IPR008271 GO:0004672|GO:0006468
Amo19g0650 962 PANTHER CELL DIVISION CYCLE 7-RELATED PROTEIN KINASE 439 941 - -
Amo19g0650 962 MobiDBLite consensus disorder prediction 696 718 - -
Amo19g0650 962 ProSiteProfiles Protein kinase domain profile. 468 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g0650 962 MobiDBLite consensus disorder prediction 288 314 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0650 801 935 Core Cell Cycle Gene Families AT3G48750 33.333 3.19e-10 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-2 Amo19g0650 Pkinase 2.3e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0650 K02214 - gmx:100795742 1036.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0650 19 10060389 10066448 Amo19g0650 19 10060389 10066448 ECH