Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0646 ATGGAAGGAGTAGTAGGAGAGAGAGGAAGTAATAGAAGTAGTAGTAGTAATCATCCCATTATTATTCCAAATAATAATAATTATGATCTCCAAATCTCATTCACAAACACAATGGGTTTTGTTCATTTTGAAGATCACAACCAAGTTCTTAGCTTCTTGACACCTTCTCTTGCCGCTCCTCCATCTCTTTCTCATCACTCTCTAGAAGATGTTCGTGGCGACAGTAATAGTACTGCTAATACAATTATTGCCGCCGCTACAACTTCTACAGCTACAGCCACAGTCACAGCCACAACCACGGCCGGATTCGGCCATGACGAGCTTGTTCCAAGAACTACTTGGAAAAATGATGACCAGGTTAGAAGCATGGATCCGAAGGGTATGAATAATAACAATGATGAAAATTGCACTGGAAATAGTAGTGATGGAAACAACTCATCATGGTGGAAGAATGGAGGGTCAGAAAAGGGGAAGGTGAAAGTGAGGAGGAAGTTGAGAGAACCAAGGTTTTGTTTCCAAACAAGAAGTGATGTTGATGTTCTTGATGATGGTTACAAATGGAGAAAGTATGGCCAGAAAGTTGTCAAGAATAGCCTTCATCCAAGAAGCTACTACCGTTGCACACATAACAATTGTAGGGTGAAGAAAAGAGTTGAAAGGCTCTCTGAAGATTGTAGAATGGTTATTACAACCTATGAAGGTAGACACAATCACTCTCCATGTGATGATTCTAATTCTTCTGAACATGAATGTTTCACCTCTTTTTGA 768 0.3997 MEGVVGERGSNRSSSSNHPIIIPNNNNYDLQISFTNTMGFVHFEDHNQVLSFLTPSLAAPPSLSHHSLEDVRGDSNSTANTIIAAATTSTATATVTATTTAGFGHDELVPRTTWKNDDQVRSMDPKGMNNNNDENCTGNSSDGNNSSWWKNGGSEKGKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHECFTSF* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0646 255 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 34 253 IPR044810 GO:0003700
Amo19g0646 255 MobiDBLite consensus disorder prediction 123 152 - -
Amo19g0646 255 PANTHER WRKY TRANSCRIPTION FACTOR 12-RELATED 34 253 - -
Amo19g0646 255 SUPERFAMILY WRKY DNA-binding domain 173 239 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo19g0646 255 MobiDBLite consensus disorder prediction 1 22 - -
Amo19g0646 255 MobiDBLite consensus disorder prediction 108 160 - -
Amo19g0646 255 Gene3D WRKY domain 167 241 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo19g0646 255 MobiDBLite consensus disorder prediction 8 22 - -
Amo19g0646 255 SMART WRKY_cls 181 240 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo19g0646 255 ProSiteProfiles WRKY domain profile. 176 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo19g0646 255 Pfam WRKY DNA -binding domain 182 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0646 Amo-Chr19 9985209 9992157 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0646 123 255 WRKY Transcription Factor Family AT2G44745 71.324 1.27e-68 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Amo19g0646 WRKY 2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0646 - - adu:107464355 455.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0646 19 9985209 9992157 Amo19g0646 19 9985209 9992157 ECH