Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0624 ACCCTGAAACACCCTCTCATTGCAGCTGCGCAACCAAAAACGAAGAGAACCAAGAAGGCCGGTATCGTTGGGAAATACGGCACTCGATATGGTGCTAGTTTAAGGAAGCAGATTAAGAAGATGGAAGTCAGCCAGCACAGCAAATTTTTCTGTGAGTTTTGCGGAAAGTATGCTGTTAAGAGAAAGGCTGTTGGTATTTGGGGATGCAAAGACTGCGGAAAGGTGAAGGCTGGAGGTGCCTATACTTTGAACACTGCGAGTGCTGTGACTGTTAGGAGCACAATTCGGAGGCTGAGGGAGCAGACTGAGAGTTGA 315 0.4794 TLKHPLIAAAQPKTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0624 104 Pfam Ribosomal L37ae protein family 16 100 IPR002674 GO:0003735|GO:0005840|GO:0006412
Amo19g0624 104 PANTHER 60S RIBOSOMAL PROTEIN L37A-2 10 104 - -
Amo19g0624 104 SUPERFAMILY Zn-binding ribosomal proteins 22 94 IPR011332 GO:0006412
Amo19g0624 104 TIGRFAM eL43_euk_arch: ribosomal protein eL43 15 103 IPR002674 GO:0003735|GO:0005840|GO:0006412
Amo19g0624 104 Hamap 50S ribosomal protein L37Ae [rpl37ae]. 16 84 IPR002674 GO:0003735|GO:0005840|GO:0006412
Amo19g0624 104 Gene3D - 13 104 IPR011331 GO:0003735|GO:0005840|GO:0006412
Amo19g0624 104 PANTHER ZGC:171772 10 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0624 Amo-Chr19 9729540 9731332 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0624 14 104 Cytoplasmic Ribosomal Protein Gene Family AT3G10950 93.407 2.65e-59 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0624 K02921 - lsv:111898551 188.348