Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0621 ATGATGATGATGAACATAAAGGGTGTTGTCTTAGCAGGGTTGTCGTTGGTGTTGTTGCATGTTGTGAATGAGTTGTTGTTGAAGCCAAGATCATTGAGATCAAAGCTTCAGAAGCAGGGTATTCATGGACCTTCTCCTCACTTCTACTTTGGTAACATCCCAGAAAAGAAGAAGATTCTAGAACAACATCAAGTTCATAATGTTGCATCTTCACACCAAGACAAAGACAAAGGTGTTTCTTCTTCTATATCTCACAGGTGGTATTACAATTTGTTTCCTCATGTTGTAAAATGGAGAAGACAATATGGTCCCATATACTTGTTTTCTTCTGGGAGTGTAGAGTGGTTGGTGGTGTCTGATATAGAAATGGTGAAAGAAATCACCCTTTACACATCTGTGAATCTAGGGAAGCCTTCTCTTCAATCCAGAGAATTAGGGCCACTCTTAGGTCAAGGTATATTGTCATCAAGTGGACCAATTTGGGTTCATCAGAGGAAGATCATTGCTCCTTCATTATACCTTGATAAGGTCAAGGAAATGGTTAACTTGATTGTTCACTCCACAAATATAACACTCAAGTCTTGGGAAAGTAGACTCAATAATGAAGGAGAGGCTTTGGACCTTAGAATCGACGACGATTTGCGAAGCTTGTCAGCCGACATAATCGCAAGAGCTTGTTTTGGGATCAATTATGTTGAAGGAAATGAAATATTTTCAAAGCTTAGAGATCTTCAAAACCTCTTGTCTGCAAAGGAAGCTGGAATTCCAGGCTTTAGATGCCTGCCAATTAAAAGAAACAGAGAGATATGGAGATTGGAGAAAGAGGTAAACTCAATGATATCAAAGATCATAGACGAGCGGTTGAAGCAAGATGCAGAAGAGCAAGATCTTTTACAAATGATACTTGAAGGTGCAAAGAGTTGTGAGGGGAATGATGGAATCTTATCAGATTCGATATCTCGCGACAGGTTCATAATAGATAACTGCAAGAACATATTCTTTGCTGGACATGAGAGTACTGCAATTACAGCATCATGGTGCTTGATGTTGCTAGCCATACACCAGGATTGGCAAGATCGAGTTAGGGCCGAGGTTCTTCAAGTTTGTGGCAACAATCCTCCACATGCAAGTATGCTTAGAAAAATGAAGATGCTGACCATGGTGATTCAAGAAACAATGCGGCTTTATCCGGTGGCGGCGTTTGTTTCGAGATCAGCATTGGAAGACATTCACTTGAAAGGTATCCTAATTCCAAAAGGAATGAACATTGAGATTTCAGTCCCAATACTAATGCAAGACCCTGAGATTTGGGGTCATGATTCACACGAGTTCAATCCAGAAAGATTCTCAAATGGGATTGTTGGAGCTTGCAAATTCCCACAAGCATATGTTCCATTTGGATTAGGGGCTAGGATTTGTGCTGGGCAACACTTAGCCATGACAGAATTGAAGGTGATTTTGTGTCTCATTTTGATCAAGTTTAGGATCTCTTTGTCTCAGAGTTATTGCCATTCACCTATCTTCCGTTTGGTTATAGAACCTGGCTATGGTGTTATTCTAAATATCACAAGAATTTAG 1578 0.4005 MMMMNIKGVVLAGLSLVLLHVVNELLLKPRSLRSKLQKQGIHGPSPHFYFGNIPEKKKILEQHQVHNVASSHQDKDKGVSSSISHRWYYNLFPHVVKWRRQYGPIYLFSSGSVEWLVVSDIEMVKEITLYTSVNLGKPSLQSRELGPLLGQGILSSSGPIWVHQRKIIAPSLYLDKVKEMVNLIVHSTNITLKSWESRLNNEGEALDLRIDDDLRSLSADIIARACFGINYVEGNEIFSKLRDLQNLLSAKEAGIPGFRCLPIKRNREIWRLEKEVNSMISKIIDERLKQDAEEQDLLQMILEGAKSCEGNDGILSDSISRDRFIIDNCKNIFFAGHESTAITASWCLMLLAIHQDWQDRVRAEVLQVCGNNPPHASMLRKMKMLTMVIQETMRLYPVAAFVSRSALEDIHLKGILIPKGMNIEISVPILMQDPEIWGHDSHEFNPERFSNGIVGACKFPQAYVPFGLGARICAGQHLAMTELKVILCLILIKFRISLSQSYCHSPIFRLVIEPGYGVILNITRI* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0621 525 Pfam Cytochrome P450 91 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g0621 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 466 475 IPR017972 GO:0005506|GO:0016705
Amo19g0621 525 PANTHER CYTOCHROME P450 FAMILY MEMBER 8 520 - -
Amo19g0621 525 PRINTS P450 superfamily signature 335 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g0621 525 PRINTS P450 superfamily signature 473 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g0621 525 PRINTS P450 superfamily signature 464 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g0621 525 PRINTS P450 superfamily signature 387 398 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g0621 525 SUPERFAMILY Cytochrome P450 86 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g0621 525 PRINTS E-class P450 group I signature 99 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g0621 525 PRINTS E-class P450 group I signature 386 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g0621 525 PRINTS E-class P450 group I signature 463 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g0621 525 PRINTS E-class P450 group I signature 473 496 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g0621 525 PRINTS E-class P450 group I signature 324 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g0621 525 PRINTS E-class P450 group I signature 344 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g0621 525 PRINTS E-class P450 group I signature 217 235 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo19g0621 525 PANTHER CYTOCHROME P450 FAMILY PROTEIN 8 520 - -
Amo19g0621 525 Gene3D Cytochrome P450 29 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0621 Amo-Chr19 9692573 9695810 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0621 123 522 Cytochrome P450 AT5G24900 45.610 6.67e-127 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0621 K24544 - gmx:100780335 739.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0621 19 9692573 9695810 Amo19g0621 19 9692573 9695810 ECH