Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0615 ATGCATATGATCTTCTACTTTAACAGTGAAATTCTTTCTGAGATTGAGCATTTGTGTCAAATTTTTGGCACAACAGTTATAAATAATTATTTAATATATAAATTGCATTCTTCATTTACATTATTAGGGTTTATTGTTGCTGCGGTGCTGCCTCGTGTGGCACTTTCTGTCCCTCACAGCCTCACTCCACCAATTACCAGAGGCAGAGTCTTCTTCTTCTTCTTCTTCTTCATCATTCTTCAATTTCTCACAGACGGTGAGATGGGGAGAAGAAACGGGGGAAGGCCACTGCTCGGAACTCTCCGTCGTCGATTGGATTCGTGCAAGTCCCGCTACACCACCGTCGATGACATCGTTAACCACCTCCGCTCCACTTACCCCGATTACCAGCGCACCAAGCAGCAAGCCCTCACTCGATTAGTTCAACAAGTCCTCGAGCCACGTGCCAAACACGCGCCGCCCAAAGTCTCTCCCACGCGCGACGACGAAGACGATGACGAAGAAAGAGGTCGAAGCGCGCCCCGAAGGAGACGGAATACAATCGACCAAGGCGAAGAAAGGTTGCAGAAGATGGAGGCTTTGCACCTGCGTAAAAGGATGCAGGGAGAAGAGGAAGCTCAGGGTTCTGCTTCTACGTCCTCTGCTTCAAGCTCGAGCGCGTCCGGGAGCAGCGGCAGTGAGGAGGAGGAGGATGATGATGATGGCGCAGTATCTATGTCGACATCGGAGGACGCAATTTACGGGGAGAAGTACGAACCTGCTTTCGATTTGATGAAGACGATGCTGCGGAATAAGTACACTCCCAAAAAGGATGATAATGTGAGGAAGAAGAAGCCAGTTGTGGAGGATAAGAACGTTGAATTGGAGGTGGCCAATAGTAGCAAGGTTACTAACGAGCTTTGTGCTGTGAACGGAGGCAGAGGCGAAGCGAAAGCTGCTGCGAAGGATGTGAATTCAAAGGGTTCCGTTTCGAATGGCACCGGTGGTGGTGGCAGCGATGTTGAATTGAAACAGAAGACGGGACCGAGGTTCAGTGATTTGGGTGGAATGCAGGATGTTTTGGAGGAGCTGATGGAAGTGATTGTGCCATTGTATCATCCCGAGTTGCCAAGAGAGCTGGGTGTTACTCCTACTAKTGGAATCTTGCTGCATGGGCCACCTGGTTGTGGCAAGACCACACTGGCTCACGCCATAGCTAATGAGACCGGTCTTCCCTTCTATCAGATATCAGCTACTGAATTGGTTTCAGGAGTCTCAGGTGCATCTGAAGAGAATATTAGAGAGCTTTTCACTAAAGCATATAGGACTGCCCCATCAATCGTCTTCATTGATGAGATTGATTCAATTGCTTCGAAAAGAGAGAATTTACAACGAGAGATGGAGAAGAGAATTGTAACACAGTTACTGGTTAGCATGGATCAATCAAGTAGGCGTATGGAATCTGCTAATGATTCGGACAGTTCTAAAGTTCATRCTGGCCATGTTCTTYTAATTGGAGCAACAAATAGGCCTGATYCTCTTGACCCGGCCTTGAGAAGGCCTGGGKGGTTTGATCGTGAGATTGTTGTTGGCATTCCTGATGAATCTTCAAGAGAGCATATCCTTACTATGCTTACACGCAATCTTAAACTTGAGGGTTCATTGGATCTTAAACATATAGCAAGATCTACGCCAGGATACGTCAGTGCTGATTTGGTAGCTGTGGTTAAGGAGGCTGGTAATTTGGCAATAAAGAGAATCATTTCTGGAAGGAAATGGGAACTATCTCAGGATCATACAAGGTGTCTTGGAGACTGGTGGAAGGAACCTTGGTCGCATGAAGATGTGGATAAGCTTGTTTGCACAATGTCTGATTTTCAGGAAGCAGTGAAAAAGGTACAACCTTCATTAAGAAGAGAGGGCTTCTCATCCGTTCCCAATGTGAAATGGGAAGATGTTGGGGGCCTTGATTGTTTAAGGGAGGAGTTTGAATCCAGTATAATAAGGCCAATAAAATATCCCGAGGTTTATCAGACATTTGAGGTGGTAAATGAGACGGGAATTTTGCTTTTTGGGCCCCCTGGTTGCGGTAAAACTCTTATTGCCAAAGCTGTTGCCAATGAGGCAGGAGCTAATTTCATTCATATTAAGGGGCCTGAACTCTTAAATAAATTTGTTGGAGAAAGTGAGCGAGAAGTTCGACGAGTGTTTAGTCGTGCAAGGGCATGTTCACCCTGTATAGTATTTTTTGACGAGGTGGATGCTCTATCAACCAAACGGGATTCGGAAGGTGGATCGGTAGTCGAACGAGTAGTGAACCAGTTACTTATTGAGCTAAATGGTGGCGACCAGCGCCAAGGTGTTTTTGTTATTGGTGCTACAAATAGGCCCGATGTGATGGATGAGGCTCTCCTCCGTTCTGGTAGACTTGGTAAATTTCTTTACGTTCCTGTGCCGAACGCTGACCAGCGATTTTCAATATTGAAAGCTCTTGCAAGGAAGAAGCCTGCTGATTCTACTGTGGATTTGAGAGCCATAGCTGAAGCTTGTGAAAATTTTAGTGGCGCAGACCTTGCTGCATTGATGAATGAAGCAGCTAAAGCTGCTGTCAATGAGAAATTGACCTCAGTTGAAGCTACTAGTGATACTAATACATACATGCCAAGGCATTTCGAGATAGCACTTACTAAAGTCTCTCCCTCTGTGTCTCCCGCGGAAAGGCGTAGGTACGAGCGTTTGGCAGAGCGCTTTAAAGCATCATGA 2742 0.4613 MHMIFYFNSEILSEIEHLCQIFGTTVINNYLIYKLHSSFTLLGFIVAAVLPRVALSVPHSLTPPITRGRVFFFFFFFIILQFLTDGEMGRRNGGRPLLGTLRRRLDSCKSRYTTVDDIVNHLRSTYPDYQRTKQQALTRLVQQVLEPRAKHAPPKVSPTRDDEDDDEERGRSAPRRRRNTIDQGEERLQKMEALHLRKRMQGEEEAQGSASTSSASSSSASGSSGSEEEEDDDDGAVSMSTSEDAIYGEKYEPAFDLMKTMLRNKYTPKKDDNVRKKKPVVEDKNVELEVANSSKVTNELCAVNGGRGEAKAAAKDVNSKGSVSNGTGGGGSDVELKQKTGPRFSDLGGMQDVLEELMEVIVPLYHPELPRELGVTPTXGILLHGPPGCGKTTLAHAIANETGLPFYQISATELVSGVSGASEENIRELFTKAYRTAPSIVFIDEIDSIASKRENLQREMEKRIVTQLLVSMDQSSRRMESANDSDSSKVHXGHVLLIGATNRPDXLDPALRRPGXFDREIVVGIPDESSREHILTMLTRNLKLEGSLDLKHIARSTPGYVSADLVAVVKEAGNLAIKRIISGRKWELSQDHTRCLGDWWKEPWSHEDVDKLVCTMSDFQEAVKKVQPSLRREGFSSVPNVKWEDVGGLDCLREEFESSIIRPIKYPEVYQTFEVVNETGILLFGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKFVGESEREVRRVFSRARACSPCIVFFDEVDALSTKRDSEGGSVVERVVNQLLIELNGGDQRQGVFVIGATNRPDVMDEALLRSGRLGKFLYVPVPNADQRFSILKALARKKPADSTVDLRAIAEACENFSGADLAALMNEAAKAAVNEKLTSVEATSDTNTYMPRHFEIALTKVSPSVSPAERRRYERLAERFKAS* 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0615 913 CDD AAA 380 524 - -
Amo19g0615 913 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 639 909 IPR027417 -
Amo19g0615 913 MobiDBLite consensus disorder prediction 153 204 - -
Amo19g0615 913 Gene3D - 812 889 - -
Amo19g0615 913 Gene3D - 526 633 - -
Amo19g0615 913 Pfam AAA+ lid domain 548 590 IPR041569 -
Amo19g0615 913 Pfam AAA+ lid domain 834 872 IPR041569 -
Amo19g0615 913 ProSitePatterns AAA-protein family signature. 495 513 IPR003960 GO:0005524|GO:0016887
Amo19g0615 913 Gene3D - 332 524 IPR027417 -
Amo19g0615 913 PANTHER NUCLEAR VALOSIN-CONTAINING PROTEIN-LIKE 148 909 - -
Amo19g0615 913 CDD AAA 680 810 - -
Amo19g0615 913 SMART AAA_5 677 813 IPR003593 -
Amo19g0615 913 SMART AAA_5 377 527 IPR003593 -
Amo19g0615 913 Gene3D - 639 904 IPR027417 -
Amo19g0615 913 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 343 625 IPR027417 -
Amo19g0615 913 PANTHER AAA-FAMILY ATPASE 148 909 - -
Amo19g0615 913 Pfam ATPase family associated with various cellular activities (AAA) 681 810 IPR003959 GO:0005524|GO:0016887
Amo19g0615 913 Pfam ATPase family associated with various cellular activities (AAA) 381 523 IPR003959 GO:0005524|GO:0016887
Amo19g0615 913 MobiDBLite consensus disorder prediction 205 224 - -
Amo19g0615 913 MobiDBLite consensus disorder prediction 142 245 - -
Amo19g0615 913 Pfam Nucleolin binding domain 106 146 IPR031996 -
Amo19g0615 913 MobiDBLite consensus disorder prediction 313 342 - -
Amo19g0615 913 ProSitePatterns AAA-protein family signature. 781 799 IPR003960 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0615 Amo-Chr19 9549560 9554317 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0615 338 911 Calmodulin-binding Proteins AT3G56690 36.190 8.87e-117 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0615 K14571 - gmx:100809594 959.518