Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0601 ATGGAGCCTCGAGTTGGGAACAAGTTCCGTATCGGTCGGAAAATTGGTAGCGGATCCTTTGGAGAGATCTATCTCGGTACTAATATTCAAACAAATGAAGAGGTTGCGATTAAGCTTGAAAATATCAAAACCAAGCACCCTCAGTTGCTGTATGAATCAAAGCTGTATAAAATACTGCAAGGAGGAACTGGGATCCCAAATGTGAAATGGTATGGCGTAGAAGGAGAATACAATGTGCTTGTGATGGATTTACTGGGCCCTAGTCTTGAGGATTTATTCAATTTCTGTAGTCGGAAATTGTCTCTCAAAACTGTTCTCATGCTTGCTGATCAGATGATAAATCGAGTTGAATTTGTTCATTCAAAATCATTTTTGCATCGGGATATCAAGCCAGACAATTTCCTCATGGGTTTAGGGAGGCGTGCGAATCAAGTGTATATCATTGACTTTGGTCTTGCTAAGAAATACAGGGACACTTCTACACATCAGCATATTCCTTACAGAGAGAATAAGAATTTGACAGGAACGGCTAGGTATGCTAGCATGAATACTCATCTTGGAATTGAGCAAAGCCGCAGGGATGATTTAGAGTCACTTGGATATGTACTTATGTATTTTTTAAGAGGAAGTCTGCCTTGGCAGGGACTAAAAGCAGGAAATAAGAAACAGAAATATGAAAAAATCAGTGAGAAGAAAGTTTCTACTTCAATTGAGTCTCTCTGTCGTGGCTATCCCTCAGAATTTGCGTCATACTTCCATTACTGCCGGTCACTTAGGTTTGATGATAAACCAGATTACGCTTATTTGAAGAGACTTTTTCGTGACCTTTTCATTCGTGAAGGATTCCAGTTTGATTATGTGTTCGATTGGACCATATTGAAATATCAACAATCTCAAGTTGCCACTCCTCCTGCCCGTGCTGTGGTTCCTGCTGCTGGACCAAGTTCTGGCATGCCATCAGCTGTTTTGAATGCTGATGGCCAGTCAGGTGAAGATGGTAGGCGAATTGGTTGGTCTTCATCAGATCCTACCCGTAGAAGACACTCTGGACCTGTTGCTAATGATGGAATCTTATCTAGACAAAAAGCCCAACTTATAAATGACTCGACTGGATCTAAAGATGCTATGTTGCCAAGTTCTAATTTCTTCCTCTCAAGTGGATCTAACAGGCGAGGTGCTGTATCCAGCAGCCGTGATGCGCTCGTTGGCGGTGAGACAGAGCCCTCTCGTCCCCTCACCATGGAATCTACTCAAGGTGCAATTCGAAAAATGTCCGGCCCTCAAAGAAGTTCACCCATCACATCATCTGAGCTCAACCGACCAGCCTCTGGCAGAAATCCAGCAAACGGAAAGAATTTGGAGTCCACTGTTAAAGGCATAGAAAGCCTGCATTTCAATGATGAGAGGGCACAGTATTAG 1419 0.4278 MEPRVGNKFRIGRKIGSGSFGEIYLGTNIQTNEEVAIKLENIKTKHPQLLYESKLYKILQGGTGIPNVKWYGVEGEYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGNKKQKYEKISEKKVSTSIESLCRGYPSEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQVATPPARAVVPAAGPSSGMPSAVLNADGQSGEDGRRIGWSSSDPTRRRHSGPVANDGILSRQKAQLINDSTGSKDAMLPSSNFFLSSGSNRRGAVSSSRDALVGGETEPSRPLTMESTQGAIRKMSGPQRSSPITSSELNRPASGRNPANGKNLESTVKGIESLHFNDERAQY* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0601 472 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g0601 472 Pfam Protein kinase domain 10 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g0601 472 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Amo19g0601 472 PANTHER CASEIN KINASE-RELATED 1 457 - -
Amo19g0601 472 MobiDBLite consensus disorder prediction 310 361 - -
Amo19g0601 472 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Amo19g0601 472 MobiDBLite consensus disorder prediction 384 472 - -
Amo19g0601 472 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g0601 472 Gene3D Transferase(Phosphotransferase) domain 1 1 310 - -
Amo19g0601 472 PANTHER CASEIN KINASE 1-LIKE PROTEIN 2 1 457 IPR030509 GO:0004672|GO:0005524
Amo19g0601 472 MobiDBLite consensus disorder prediction 410 456 - -
Amo19g0601 472 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Amo19g0601 472 CDD STKc_CK1_delta_epsilon 8 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0601 Amo-Chr19 9329323 9333515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0601 7 228 CBL-interacting serine-threonine protein kinases AT5G58380 28.916 4.92e-14 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Amo19g0601 Pkinase 4.8e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0601 K02218 - gmx:100778165 801.971