Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0600 ATGGCACACAAGAGAATAAGAGAACGGCTTCGAAGAAGCGCACTTTACACGTTTGCATGTCTCGGAAACCGTGCAACAGAAGATGACCAACCTCACGCGCTTCACGGCGCGGGATACACACGCACCGTGCATTGCAACCAACCACACCTTCATGAAATCAAACCCCCTTACTATTGCAAGAACAACATTTCTACAACCAAATACAATGTTATCACGTTTCTTCCAACCGCACTCTTTGAACAATTCAGAAGGGTCGCTAACATTTACTTTCTTTTAGCGGCACTTCTCTCTGTCTTCCCAATCTCTCCCTTTAGCCCAATAAGCATGATCGCGCCTTTGGCGTTTGTAGTGGGGCTTAGTATGGCCAAGGAAGCATTGGAAGATTCTAGAAGGTTCCTTCAGGATGTCACGGTTAATAACCGGAAAGTGAATCACCATACCGGAAACGGTGTTTTTGAACCCAAGGCATGGAAGGATATTAGGGTTGGTGATYTTGTTAAAGTAGAAAAAGATGAATTCTTCCCTGCGGATCTTCTTTTCTTGTCATCAAGCTATGAGGATGGGATTTGTTACGTTGAGACAATGAATTTAGATGGCGAAACGAATCTAAAGGTGAAAAGATCTTTGGAAGCTACCTTGGGTCTTGARAGRGATGAAACTTTTAAGGATTTTACRGGAACGATTCAAGGTGAAGATCCGAATCCGAGTTTATACACTTTCGTTGGGAACTTTGATTATGAACGACAGGTTTATCCTCTTGATCCGAGTCAAATTCTGCTCCGTGATTCTAAGCTTAGAAACACTGATCACATTTATGGAGTTGTGATTTTCACTGGTCATGACACYAAAGTGATGCAGAATTCAACACGTTCTCCTTCGAAAAGAAGCACCATTGAAAAAAAGATGGATTTAATCATATACATTCTCTTCGCTGTTCTTGTTATCATKTCGGTTYTGAGTTCCGTAGGGTTCATGATAAAGACGAAGTACAAGGCACCYAACTGGTGGTTCTTGAGGCCTGATAARATTGAAGTTCAGTATGATCCACAGAAGCTTGGATTGGCTGGGTTGAGTCATTTGATTGTGAAGGTTTTACAAGCAAGCTTTATTAACCAAGATATTCACATGTATGATGAAGAAACTGGGACTGCAGCTGATGCAAGAACTTCGAATTTGAATGAAGAGTTGGGTCAAGTTGACACCATTCTTTCTGATAAAACTGGAACGTTGACATGCAACCAGATGGACTTTTTGAAATGCTCCATTGCTGGTGTTGCGTACGGTGTTCGTGCAAGCGATGTTGAAGTCGCTGCGGCGAAACAAATGGCATCGGAGGTTGACAAAGATGGAGAGGAGAGTGATGTTAATGAGAATTATAGTAGTTCAGAGAGTGGCGGTTCAAAAAGGCCTCCAATAAAAGGGTTTGGTTTTGAGGATGATCGTTTGATGAATGGAAACTGGGTGAAAGAGGCTAACGTGGATGACCTTTTGTTGTTTTTTCGAATATTGGCGGTTTGTCATACCGCCATTCCTGATTATAATGAAGTAACTGGGAGTTTTACATATGAAGCGGAGTCACCTGATGAAGGTGCTTTTCTTGCTGCAGCAAGAGAATTTGGGTTTGAGTTTTGTAGAAGGACTCAGTCAAGTGTTTTCATACGTGAAAAATATACTAATCCTGGACAAGTCGTTGAAAGAGAATTTAAACTCTTGAATTTGCTTGATTTCTCAAGTAAAAGAAAACGTATGTCAGTGATTGTGAGAGATGAAGAAGGAAACATTATTCTTATGTGTAAGGGGGCTGACAGTATCATATTTGARCGTTTGGCAAAGAATGGAAAAAAGTATTTGGAGTCTACAACTAGACATTTAAATGAATATGGAGAAGCCGGGTTGCGAACACTAGCCTTGTCTTATAAAAGGCTTGATGAGGAAGAATACTCTGCTTGGAACAATGAGTTTCAGAAAGCTAAAACTTCTGTTGGCGTTGACAGAGAAGCAACACTTGAGCGCGTTTCAGAGATGATGGAAAAAGACTTGATTCTTGTTGGAGCTACAGCTGTGGAAGATAAGCTCCAAAAAGGGGTTCCCCAGTGCATTGACAAACTTGCCCAGGCAGGGCTTAAGATCTGGGTATTGACAGGGGATAAAATGGAAACAGCAATCAACATTGGATTTGCATGCAGTTTGCTACGACAGGGCATGAAGCAGATCTGTATAACTATTCCSAATTTAGATGCAATGCCGGCCAGTGATAGCACCAAAGAGGCCATCAAAGATAACATTTTGAACCAAATTACGAATGCATCACAAATGATAAAGCTAGAGAAGGATCCTCATGCTGCATTTGCATTAATTATTGATGGAAAAACTTTGACCTATGCTTTAGAAGATGATATGAAGCGCCTATTCCTTGCATTGGCCGTTGATTGTGCATCAGTCATATGCTGTCGTGTCTCTCCCAAGCAAAAGGCATTGGTAACAAGGTTAGTGAAAGAAGGAACCAAGAAGACCACACTAGCAATAGGTGATGGTGCAAATGATGTTGGCATGATTCAAGAAGCAGATATTGGTGTTGGAATCAGTGGGGTTGAAGGGATGCAGGCGGTGATGGCTAGTGACTTCGCTATTGCCCAGTTTCGGTTTTTAGAGAGACTTCTCGTGGTCCATGGACACTGGTGTTATAAGAGAATTGCACAAATGATATGTTATTTCTTCTACAAGAACATAGCATTTGGACTAACCATATTCTATTTTGAGGCCTTTACAAGCTTCTCTGGTCAATCAGTTTATGATGACTGGTACATGATATTGTTCAACGTTGTTCTAACATCCTTGCCTGTCATTTCACTTGGAGTTTTAGAACAAGATGTTCCATCAGAAGTTTGCTTACAGTTTCCTGCACTGTATCAGCAAGGACCAACAAATTTATTCTTTGATTGGTATAGAATACTGGGATGGATGGCCAATGGTGTTTACTCCTCAATAGCCATCTTTTTCTTTAACATCATAATCTTCTACGACCAAGCATTCCGGTCCGACGGTCAAACCGCCGACATGGCCGCGGTCGGCACCTCAATGTTCAGCAGCATCATTTGGGCCGTGAACTGCCAAATTGCCCTAACAATGAGCCACTTCACATGGGTTCAACATGTGTTTGTTTGGGGAAGCATAGCCACTTGGTACATCTTCCTCTTCTTATATGGTGCCCTTTCACCAACATACTCCAAGAATGCCTATAAAATATTGGTTGAATCTCTTGGACCTGCACCCATTTATTGGATAGCAACGTTCTTGATATCAGTTTCTTGCTTCCTTCCATATCTAACTCACATAGCTATCCAAAGATGTTTCAATCCCATGGATCATCATATTATACAAGAGATTAAGTACTACAAGAAGGATATTGAAGATAGACACATGTGGAAGAGGGAGAGATCTAAGGCTAAACAAGAGACAAAGATTGGATTCACTGCAAGAGTTGATGCTAAGATAAGACAGATTAAAGAAAAGTTACATATAAAGCAACAGCAACAACAACAACATTCTACACTTACCAGTTCAACAACCCAATCACCCTCCTTATTGTAA 3591 0.4099 MAHKRIRERLRRSALYTFACLGNRATEDDQPHALHGAGYTRTVHCNQPHLHEIKPPYYCKNNISTTKYNVITFLPTALFEQFRRVANIYFLLAALLSVFPISPFSPISMIAPLAFVVGLSMAKEALEDSRRFLQDVTVNNRKVNHHTGNGVFEPKAWKDIRVGDXVKVEKDEFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRSLEATLGLERDETFKDFTGTIQGEDPNPSLYTFVGNFDYERQVYPLDPSQILLRDSKLRNTDHIYGVVIFTGHDTKVMQNSTRSPSKRSTIEKKMDLIIYILFAVLVIXSVLSSVGFMIKTKYKAPNWWFLRPDKIEVQYDPQKLGLAGLSHLIVKVLQASFINQDIHMYDEETGTAADARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGVAYGVRASDVEVAAAKQMASEVDKDGEESDVNENYSSSESGGSKRPPIKGFGFEDDRLMNGNWVKEANVDDLLLFFRILAVCHTAIPDYNEVTGSFTYEAESPDEGAFLAAAREFGFEFCRRTQSSVFIREKYTNPGQVVEREFKLLNLLDFSSKRKRMSVIVRDEEGNIILMCKGADSIIFERLAKNGKKYLESTTRHLNEYGEAGLRTLALSYKRLDEEEYSAWNNEFQKAKTSVGVDREATLERVSEMMEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITIPNLDAMPASDSTKEAIKDNILNQITNASQMIKLEKDPHAAFALIIDGKTLTYALEDDMKRLFLALAVDCASVICCRVSPKQKALVTRLVKEGTKKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFAIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTIFYFEAFTSFSGQSVYDDWYMILFNVVLTSLPVISLGVLEQDVPSEVCLQFPALYQQGPTNLFFDWYRILGWMANGVYSSIAIFFFNIIIFYDQAFRSDGQTADMAAVGTSMFSSIIWAVNCQIALTMSHFTWVQHVFVWGSIATWYIFLFLYGALSPTYSKNAYKILVESLGPAPIYWIATFLISVSCFLPYLTHIAIQRCFNPMDHHIIQEIKYYKKDIEDRHMWKRERSKAKQETKIGFTARVDAKIRQIKEKLHIKQQQQQQHSTLTSSTTQSPSLL* 1197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0600 1196 SUPERFAMILY Calcium ATPase, transduction domain A 146 287 IPR008250 -
Amo19g0600 1196 SUPERFAMILY Calcium ATPase, transmembrane domain M 57 1117 IPR023298 -
Amo19g0600 1196 Gene3D - 679 882 IPR023214 -
Amo19g0600 1196 ProSitePatterns E1-E2 ATPases phosphorylation site. 405 411 IPR018303 -
Amo19g0600 1196 Gene3D - 115 289 - -
Amo19g0600 1196 Pfam Cation transport ATPase (P-type) 506 609 - -
Amo19g0600 1196 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 58 1128 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Amo19g0600 1196 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 410 648 IPR023299 GO:0000166
Amo19g0600 1196 SFLD Haloacid Dehalogenase 387 893 - -
Amo19g0600 1196 MobiDBLite consensus disorder prediction 1176 1196 - -
Amo19g0600 1196 CDD P-type_ATPase_APLT_Dnf-like 61 995 - -
Amo19g0600 1196 Pfam Phospholipid-translocating P-type ATPase C-terminal 870 1120 IPR032630 -
Amo19g0600 1196 SFLD p-type atpase 387 893 IPR044492 -
Amo19g0600 1196 SUPERFAMILY HAD-like 391 886 IPR036412 -
Amo19g0600 1196 MobiDBLite consensus disorder prediction 1177 1196 - -
Amo19g0600 1196 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 813 924 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo19g0600 1196 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 1177 - -
Amo19g0600 1196 Gene3D - 531 663 IPR023299 GO:0000166
Amo19g0600 1196 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1177 - -
Amo19g0600 1196 Pfam Phospholipid-translocating ATPase N-terminal 43 110 IPR032631 -
Amo19g0600 1196 PRINTS P-type cation-transporting ATPase superfamily signature 403 417 - -
Amo19g0600 1196 PRINTS P-type cation-transporting ATPase superfamily signature 842 861 - -
Amo19g0600 1196 MobiDBLite consensus disorder prediction 445 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0600 Amo-Chr19 9315075 9322124 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0600 1 1192 Primary Pumps ATPases AT1G17500 71.757 0.0 1830
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0600 K01530 - gmx:100819559 1902.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0600 19 9315075 9322124 Amo19g1089 19 19771030 19777637 PCT
Amo19g1089 19 19771030 19777637 Amo19g0600 19 9315075 9322124 PCT