Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0596 ATGGACACTACTCCGGCGAGGTTCATGTTGAGCTACGGTGGCGAGATCAAGCCCCGCGACGGCCACCACCACCGCTCCTCCTATGCTGGCGGCGTCCACAAGATGTTCCACGTTGACGGCAACATAAACTTCGACGATATGACCGCCAAGCTCTCCTTACTCAAGGGCGGCGATGCTGTAACCTCCTTTAAGTATCTCATCCCCGGCGACGACCTCGATACCCTGGTCACTGTCGACAACGAGATGGACCTCAGTAACCTTATGAGCGAATACGATCTGCACTGCCACGGTTCCGGTTGGCTCGCCCCGATGAGGATCTTTCTCGACACCGTCGAACAAGGCGGCGTCGCTGTTGTTCCTCAGGCACCTGTTCCGCCGAGTGCCTCTGACGAGGATCGCGTGAACATGGAGCTGGAGGGTCAGTTGGAGCAGCAGTGGGGGCGCGTTTCGGGTCGCGCGTCGTTCTCTTTGCCCGGACCGTTAACTCTTGCATCGGCGCTCTTCTTACTCGTTGCCCTGATTCTTCTTGTTTCGCTACCGATGGCACTTCTCATACTTCAAAACTATTCAATTAAGAACGCAATGACCGAGATCAGGAGCACAGAACCTCCTCGCGACAGGCTTATTCAATTCGAGAAGTCCATCAATCAATTACCTGAAGTACTGGTCCCCGCTAAGGATACCATTGAAATGGTGTTGCATGATAAAAAGGGTAGCAGAATACATGCTTCTCTCCCAAAGGCATTGGTCAAGAAGTTTTGTCCAGTTGCTAAAATCATACAAAATGGCAATATAGATGACAAGGAACTCATTGATATAATTGTTGAGGTGGTTGGAAACAAGGGAAGACAAATTGTCTTTACTTTTGAGGATTTGGACAAAAATAGGGTGACCTGTATTTTGTTTGGAACACTGGTGGATCATATTTTTCCCCACCTTGATTCAATTGGTCCTGGACCACTCATTGTTGAGAGGGCTAAAAGTTTCTTAGACAAGGTGCATGTTCAGAGCAGTTACTATGCATCAAAGCTCCATGTGAACGTCTACATAAAAGAAGTTGTGGATTCCAAAAATAGGTTGGGGAGTACTTGCCAGATTACTTCGCAGTATATAAGTCATCTCTCATCTCAACCTAGCTATTCCGAGAGTGATGAGATTAATGGCGGATTAGTAAGATTGAAGTCAATAGAGGAGCTTCTGAATTGTGCAAATGAGGGTTCTTATTGGATTCTGGCTAGCATAGTGCGTTTGGATGTTGAAAAAGATGATTGGTTTTACAAGGGATGTACCAGATGTCCCCGGAAGCTAGAAGGTGCTGAACCATCTTATTGCAAGAAATGTGATCAAGCGGATTCCAATCCTCTTCTACGGTTGTTTAGGTTTCAAGTGATAGTGTCTGATGGCACTGGAAGAATAATATTATTGGTTCTGTGGGATAGGGAAACCCTGCAAATTGTTGGGAAGACAGCAACAGAGATAAAAGAAAACTTTTTTGATGATGATGATGCAGATACAAAGCTTCTGATTAAAGTTGCTGTGTCATCAAGGAACATTAACGGTTATGATGATGTCTATAATGTTATGAGGATATCCGATGATGAACAATTGATTGCAAAATTTGGCCGTAATGCTGCTGATTCAGTTGATGATGAGTTTCATACAACTTCTAGTTAG 1674 0.4546 MDTTPARFMLSYGGEIKPRDGHHHRSSYAGGVHKMFHVDGNINFDDMTAKLSLLKGGDAVTSFKYLIPGDDLDTLVTVDNEMDLSNLMSEYDLHCHGSGWLAPMRIFLDTVEQGGVAVVPQAPVPPSASDEDRVNMELEGQLEQQWGRVSGRASFSLPGPLTLASALFLLVALILLVSLPMALLILQNYSIKNAMTEIRSTEPPRDRLIQFEKSINQLPEVLVPAKDTIEMVLHDKKGSRIHASLPKALVKKFCPVAKIIQNGNIDDKELIDIIVEVVGNKGRQIVFTFEDLDKNRVTCILFGTLVDHIFPHLDSIGPGPLIVERAKSFLDKVHVQSSYYASKLHVNVYIKEVVDSKNRLGSTCQITSQYISHLSSQPSYSESDEINGGLVRLKSIEELLNCANEGSYWILASIVRLDVEKDDWFYKGCTRCPRKLEGAEPSYCKKCDQADSNPLLRLFRFQVIVSDGTGRIILLVLWDRETLQIVGKTATEIKENFFDDDDADTKLLIKVAVSSRNINGYDDVYNVMRISDDEQLIAKFGRNAADSVDDEFHTTSS* 558
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0596 557 PANTHER OS05G0427100 PROTEIN-RELATED 6 114 - -
Amo19g0596 557 CDD RPA1_DBD_C 393 533 IPR013955 -
Amo19g0596 557 SUPERFAMILY CAD & PB1 domains 26 110 - -
Amo19g0596 557 Pfam Replication factor-A C terminal domain 419 514 IPR013955 -
Amo19g0596 557 Pfam PB1 domain 25 108 IPR000270 GO:0005515
Amo19g0596 557 Gene3D - 379 540 IPR012340 -
Amo19g0596 557 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 6 114 - -
Amo19g0596 557 SUPERFAMILY Nucleic acid-binding proteins 394 532 IPR012340 -
Amo19g0596 557 SMART PB1_new 5 98 IPR000270 GO:0005515
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Amo19g0596 Amo-Chr19 9249352 9253391 Dispersed/Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0596 7 115 MAP Kinase Kinase Kinase AT5G57610 38.393 3.91e-11 64.3
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0596 - - ahf:112710177 625.935