Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0591 ATGCCTAACAAAAGCTTGGACTACTTTGTTTTTGATGAAATAAGGAGGAAGCTACTCAATTGGCATAAGCGTTTCGACATTATTAGTGGCATTGCTCGTGGACTTCTTTATCTTCATCAAGATTCTAGACTAAGGATTATTCACAGAGATCTAAAAACCAGCAATATTTTATTAGATGCAAATATGAATCCAAAAATATCAGACTTTGGTCTAGCAAGAACATTCTTAGGAGACCAAGCAGAGGATAAGACAGACAGAGTAGTTGGAACATATGGCTATATGCCTCCGGAGTATGTAGTGCACGGACAATTCTCAATGAAGTCAGATGTTTTTAGCTATGGTGCGATTGTATTAGAGTTGATAAGTGGGAAGAAAAATAGACAGTTCTCAGATCCAGAACACAACCTTAATCTTCTTGGGCATGCTTGGAGATTATGGTCTAATGAGAGGCCATTGGAACTATTAGATGAAGTATTAAAGGAAGGATGCACCCGTTCTGAAGTCATACGATGCATACAAGTGGGTCTGTTATGTGTGCAGCAAAGACCAGCAGATAGACCAAACATGTCATCAGTGGTTCTAATGCTAAATGGTGAGAAATTGTTGCCCAAGCCAAAAGTTCCCGGTTTTTATAATGACAGAAGTGTTACACTTGAAACAGATTCTTTGTTGAAAAATTACACATCATTTTCAACCAATGAAATTTCTAACACTATGTTAGATGCAAGATAG 732 0.3757 MPNKSLDYFVFDEIRRKLLNWHKRFDIISGIARGLLYLHQDSRLRIIHRDLKTSNILLDANMNPKISDFGLARTFLGDQAEDKTDRVVGTYGYMPPEYVVHGQFSMKSDVFSYGAIVLELISGKKNRQFSDPEHNLNLLGHAWRLWSNERPLELLDEVLKEGCTRSEVIRCIQVGLLCVQQRPADRPNMSSVVLMLNGEKLLPKPKVPGFYNDRSVTLETDSLLKNYTSFSTNEISNTMLDAR* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0591 243 Gene3D Transferase(Phosphotransferase) domain 1 1 204 - -
Amo19g0591 243 ProSiteProfiles Protein kinase domain profile. 1 202 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g0591 243 SMART serkin_6 4 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g0591 243 ProSitePatterns Serine/Threonine protein kinases active-site signature. 46 58 IPR008271 GO:0004672|GO:0006468
Amo19g0591 243 Pfam Protein kinase domain 16 132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g0591 243 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 240 - -
Amo19g0591 243 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 240 - -
Amo19g0591 243 Pfam Domain of unknown function (DUF3403) 202 243 IPR021820 GO:0004674
Amo19g0591 243 SUPERFAMILY Protein kinase-like (PK-like) 1 214 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0591 Amo-Chr19 9179940 9180946 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0591 1 210 Receptor kinase-like Gene Family AT4G23230 59.242 1.86e-92 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo19g0591 Pkinase 4.9e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0591 - - aip:107614885 490.345