Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0587 ATGATGAACAACTACTCAAGAATGTTGCTACTCATTTGGTTTTCTCTCATATCTTGCTTTAAAACCACCACTTCAAAAGATAGCTTAAGAATGAGTGAGTATATTCGAGATGGCGAGACTTTAGTCTCGGCAGGTGGAAGCTTTGAAGTGGGTTTCTTCAGCCCCGGAGCTTCGACTCGCCGGTACTTGGGCTTGTGGTATAGAGATGCATCAAGAAACAACACAATTTTGTGGGTGGCCAATAGAGAAAGACCCCTTCACAATAAGKCAGGTGTTTTGATATTCAAAGAAACAGGGGATCTTCAACTTCTTAGTGACACAAACAACACCATTTGGTCATCCAACATCTCAAGCAAAGCCTTGAGTAACTCGGTTGCACAGCTCTTGGATTCRGGKAATCTTGTGGTGAAAAATGTACCAGATACTAAGGAGGGAAGCTTTTTGTGGCAGAGTTTTGATTATCCATGCGATACRTATATTCCAGGGATGAAATTCGGCCGRGACTTAGCTACCGGCCTAGACAGATCRCTTTCGTGCTGGAAAAGTACAGAGGATCCTGCTGTRGGAGAATATTCTCTAAGAGTTGATCCTAGGGGATATCCACAGGTAATGCAAATGAAGGGTTCTGTTATAATTAGTAGAATAGGATCATGGAATGGCATTTATTTTACTGGAACTCCAGTTGAAGGCATGAGCATACTTAAGCGTAATTTCGTGTTGAATTCGAAAGAAGTGTATTTTGAGTTTGAAATACTTGATAGGTCCATCTTCTCCATACTCAAAACAAACCCTTCTGGAGATGCACAAGTTATGACTTGGACAAGTCRAACAACRAGCCGGGTTGAAGTTTCCCTAACCGGCGGGCAGTATGCCTGTGGAAGTTATGCCTTGTGTGGTTCAAATTCYGTATGTAGCATGGCTGCTGATGTTGCAACATGCGATTGCGTAAAAGGATACACTCCAAAGTTTCCTGAAAAATGGTACATCTCAGATTGGTCTAGTGGGTGTTCTAGAAARGWTGCATTGGATTGTGATGATGTAGTAGGGTTCTTGAAGTACAGTGACATGAAATTGCCAGACACATCTTCYTCATGGTATAGTGAGACAATGAACCTTGAAGAATGTCAGAAGTTATGTCTCAAAAATTGTTCTTGTACAGCATATGCAAATTTGGATATCCGCAATGGAGGRAGTGGTTGCYTACTTTGGTTTGGTAATCTTACTGACATGATGCAATTCTCAAAAGGGGGTCAAGACCTTTACATCAAAGTCCCTGCTTCAGAATTAGGTAATAGCCATGGAAATACGAATAAAAAGAAGATAGGAATTGCAGTTGGTGTAGGTATTTTTGGATTAGCAACATCCATCGCCATAACAACAATAATTAGAAATCCAGCAAGAATACTTAACAGACATAAGCAAAGACAAGAAGATATCAACCTACCAAAATTTGATTTCTCACTCTTAGCCAAAGCTACTGAAAACTTCTCAAGCAATAATAAACTTGGAGAAGGTGGTTTTGGACCGGGTAAGATGATAGATGGCCAAGAGATAGCTGTGAAAAGACTTTCTAAAAAATCTGGACAAGGGTCGGAAGAGTTCAAGAATGAAGTGATGTTGATAGCTAAACTTCAGCATCGTAATCTCGTGAAGCTTCTTGGCTACTGCATTCAAGGGGAAGAAAAAATATTAATCTATGAGTATATGCCTAACAAAAGCTTGGACTACTTTGTTTTTGGTGAAGTCAGAAGAAAGTTGCTAGATTGGCCKAAACGTTTCAACATTATTAGTGGTATTGCTCGAGGACTTCTTTATCTTCATCGAGATTCTAGACTAAGGGTTATTCATAGAGATTTAAAAACTAGCAATATCCTACTAGATGTTGATTTGAATCCAAAAATATCAGACTTTGGGTTGGCTCGAACATTCTCATGTGATCAAGTCGAGGCTAACACTGATAGGGTGGCTGGAACATATGGTTATATGTCTCCTGAGTATGCAGTGCAYGGACAATTCTCATTAAAATCTGATGTCTTTAGCTACGGTGTAATAGTACTAGAGTTGGTAAGTGGRCTAAAAAACAGGGAATTTTCAGACCCAGAAAACAATCTTAATCTTCTTGGACATGCATGGCAACTATGGACAGATGAGAGGCCACTAGAACTATTGGATGAAGAGYTAAAGGAAGGATGCATCCCTACCGAAGTCATACGGTGCATACAAGTGGGTCTGTTATGCGTGCAACAAAGACCAGAAAATAGACCAGACATGTCATCAGTGATTCTAATGTTARATGTTATTTGGTTCTTTCTCRTGTCCTGCATGAGAACCACCACTTCATCAGACAGCCTAGGAATGGCACAATATATCCGAGACGGTGAATCTTTAGTCTCAGCTGGTGGAAGCTCTGAACTTGGTTTCTTCAGCCCYGGAACTTCGACAAGTCGATATTTGGGTGTGTGGTACAGAGATACATCAGGAAATCCAACAGTTGTGTGGGTAGCTAACAGAGAAAGACCCCTTCACAACAAGTCRGGAGTTTTGCAATTCAACAAAATGGGGATTCTTCAGCTTCTTGATGAGACAAACAACACTGTTTGGTCGTCCAACATATCCAGCAAATCCTGGAGTAACTCAATTGCACRGATTTTGGATTCGGGAAATCTTGTAGTGACAAATGGGAAAAATATTTATAACAGCAGCTTTTTGTGGCAGAGTTTTGATTACCCTTGTGATACATTGATGCCTGGAATGAAGATTGGATGGAACTTYGTTACTGGTCAGGAAAAATATGTATCAAGCTGGAAAAGTGAAGAAGATCCTGCTGTGGGAGAGTATACTATAAAAATTGATCCTAGAGGATATCCACAAATAATGGTAATGAAAGGATCTCTTATATCTTTCAGAGGTGGATCATGGAATGGCCTTTATTTTACTGGATCTCCATCTCAGAACACACAAACATTTAGATCCAATTTTGTATTGAATGGAAAAGAGGTGTATTATGAGTTTGAAATGCTTGATACTTCCATTTTCACAGTACTTAAAGAATACCCTTCTGGTAATGGACAATATCTGGTTTGGACAAGCCAAACAAGAAACAAGGTACAAGTTACCCAGGTTGCGAACCAAGGTGGGTGTGAAAGGTATGCCTATTGTGGTTCAAATGCTATATGCATTGTGGATAGTAATGTTGCAATATGCAAGTGTCTGAAAGGGTATATTCCCAATCCCAAGTTTCCTAAACCACAAAATATGTCATATTGGTCCAATGGTTGTGAGAGAAAGGTTGCACTGGRTTGCAATAACACCAATGGCTTCTTGAGGTACACAGGCATAAAATTGCCAGACACATCTTCTTCATGGTATAGTGAGACAATGAACCTCCAGGAATGTCAAAAGTTTTGCCTGAAAAACTGTTCTTGTTCAGCATATTCAAGTTTGGATATTCGTAATGGAGGAAGTGGTTGTCTAATTTGGTTTCATAATCTTACTGACATTATACAATTCWCACAAGGGGGTCAAGACCTTTACCTAAAAGTCCCTTCTTCAGAATTGGCTGCTAATGGCCATGGAAACATCAAGCAAAAGAAGGTAGGAATTGCAGTTGGTGTGATTATTTTCGGATTAATCACATGTGTCAGCATAATGATTATACATCCAGGGACAAGAAAAATAATTTACAGAGAAAAACAGATGCAAGAAGATATTGATCTACCAGCATTCAATTTCTCAGTCTTAGCTAAAGCTACCGAAAAATTTTCAAGCAGTAACAAACTTGGAGAAGGTGGTTTTGGAGAAGTATACAAGGGTACATTGACTGATGGGMAAGAGTTAGCCATAAAAAGACTYTCAAAAAAGTCTGGCCAAGGGTTGGAAGAGTTCAAAACTGAAGTGGCGTTRATAGCCAAACTTCAGCATCGTAATCTTGTGAAGCTTCTTGGTTTTTGCATTCAAGGAGTAGAAAAAATATTGGTCTATGAATACATGCCRAACAAAAGCCTGGACTACTTCATTTCTGATGAAATTAGAAGGAAGTTGCTAGATTGGCCTAAACGTTTCAACATTATTAGCGGCATTGCTCGTGGACTTCTTTATCTTCATCAAGATTCTAGATTAAGAATTATTCATAGAGATCTAAAAACCAGCAACATTTTGCTGGATGCAAATTTGAATCCTAAAATATCAGACTTTGGCTTRGCACGAACATTCTTAGGCGATCAAGTGGAGGCTAACACAAACAGGATAGCTGGAACATATGGTTATATGCCTCCTGAGTATGCAGTACATGGGCAATTCTCAATGAAGTCCGATGTGTTTAGCTATGGTGTGATAGTACTAGAGTTGTTAAGTGGAAAGAAGAACAGGGAATTCTCCGACCCGGAAAACTACCTTAATCTTCTTGGACATGGATGCACCCATTCTGAAGTCATAAGATGCATACAAGTGGGCCTATTATGCGTGCAACAAAGACCAGAAGACCGACCAGACATGTTATCTGTGGTCCTAATGCTAAATGGTGAGAAATTGTTGCCCAAGCCAAAGGTCCCTGGTTTTTATATTGAAAGAGGTGTTACAATTGAAGCAGAYACTGTGTTGGGAAACRGCACACCGTTTTCAGCCAACGAAATTTCCATGACATTGTTAAATGCAAGATACAGGGGTTAA 4668 0.3935 MMNNYSRMLLLIWFSLISCFKTTTSKDSLRMSEYIRDGETLVSAGGSFEVGFFSPGASTRRYLGLWYRDASRNNTILWVANRERPLHNKXGVLIFKETGDLQLLSDTNNTIWSSNISSKALSNSVAQLLDSGNLVVKNVPDTKEGSFLWQSFDYPCDTYIPGMKFGRDLATGLDRSLSCWKSTEDPAVGEYSLRVDPRGYPQVMQMKGSVIISRIGSWNGIYFTGTPVEGMSILKRNFVLNSKEVYFEFEILDRSIFSILKTNPSGDAQVMTWTSXTTSRVEVSLTGGQYACGSYALCGSNSVCSMAADVATCDCVKGYTPKFPEKWYISDWSSGCSRKXALDCDDVVGFLKYSDMKLPDTSSSWYSETMNLEECQKLCLKNCSCTAYANLDIRNGGSGCLLWFGNLTDMMQFSKGGQDLYIKVPASELGNSHGNTNKKKIGIAVGVGIFGLATSIAITTIIRNPARILNRHKQRQEDINLPKFDFSLLAKATENFSSNNKLGEGGFGPGKMIDGQEIAVKRLSKKSGQGSEEFKNEVMLIAKLQHRNLVKLLGYCIQGEEKILIYEYMPNKSLDYFVFGEVRRKLLDWPKRFNIISGIARGLLYLHRDSRLRVIHRDLKTSNILLDVDLNPKISDFGLARTFSCDQVEANTDRVAGTYGYMSPEYAVHGQFSLKSDVFSYGVIVLELVSGLKNREFSDPENNLNLLGHAWQLWTDERPLELLDEELKEGCIPTEVIRCIQVGLLCVQQRPENRPDMSSVILMLXVIWFFLXSCMRTTTSSDSLGMAQYIRDGESLVSAGGSSELGFFSPGTSTSRYLGVWYRDTSGNPTVVWVANRERPLHNKSGVLQFNKMGILQLLDETNNTVWSSNISSKSWSNSIAXILDSGNLVVTNGKNIYNSSFLWQSFDYPCDTLMPGMKIGWNFVTGQEKYVSSWKSEEDPAVGEYTIKIDPRGYPQIMVMKGSLISFRGGSWNGLYFTGSPSQNTQTFRSNFVLNGKEVYYEFEMLDTSIFTVLKEYPSGNGQYLVWTSQTRNKVQVTQVANQGGCERYAYCGSNAICIVDSNVAICKCLKGYIPNPKFPKPQNMSYWSNGCERKVALXCNNTNGFLRYTGIKLPDTSSSWYSETMNLQECQKFCLKNCSCSAYSSLDIRNGGSGCLIWFHNLTDIIQFXQGGQDLYLKVPSSELAANGHGNIKQKKVGIAVGVIIFGLITCVSIMIIHPGTRKIIYREKQMQEDIDLPAFNFSVLAKATEKFSSSNKLGEGGFGEVYKGTLTDGXELAIKRLSKKSGQGLEEFKTEVALIAKLQHRNLVKLLGFCIQGVEKILVYEYMPNKSLDYFISDEIRRKLLDWPKRFNIISGIARGLLYLHQDSRLRIIHRDLKTSNILLDANLNPKISDFGLARTFLGDQVEANTNRIAGTYGYMPPEYAVHGQFSMKSDVFSYGVIVLELLSGKKNREFSDPENYLNLLGHGCTHSEVIRCIQVGLLCVQQRPEDRPDMLSVVLMLNGEKLLPKPKVPGFYIERGVTIEADTVLGNXTPFSANEISMTLLNARYRG* 1556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0587 1555 Gene3D Phosphorylase Kinase; domain 1 469 568 - -
Amo19g0587 1555 ProSiteProfiles Bulb-type lectin domain profile. 26 149 IPR001480 -
Amo19g0587 1555 ProSiteProfiles Bulb-type lectin domain profile. 781 904 IPR001480 -
Amo19g0587 1555 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 22 764 - -
Amo19g0587 1555 Gene3D Hepatocyte Growth Factor 342 421 - -
Amo19g0587 1555 Gene3D Hepatocyte Growth Factor 1098 1178 - -
Amo19g0587 1555 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 186 IPR036426 -
Amo19g0587 1555 SUPERFAMILY alpha-D-mannose-specific plant lectins 831 941 IPR036426 -
Amo19g0587 1555 Gene3D Transferase(Phosphotransferase) domain 1 569 769 - -
Amo19g0587 1555 Gene3D Transferase(Phosphotransferase) domain 1 1330 1511 - -
Amo19g0587 1555 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 777 1549 - -
Amo19g0587 1555 SUPERFAMILY Protein kinase-like (PK-like) 477 766 IPR011009 -
Amo19g0587 1555 ProSitePatterns Serine/Threonine protein kinases active-site signature. 614 626 IPR008271 GO:0004672|GO:0006468
Amo19g0587 1555 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 777 1549 - -
Amo19g0587 1555 SMART blect_4 787 910 IPR001480 -
Amo19g0587 1555 SMART blect_4 32 155 IPR001480 -
Amo19g0587 1555 Pfam D-mannose binding lectin 75 181 IPR001480 -
Amo19g0587 1555 Pfam D-mannose binding lectin 830 936 IPR001480 -
Amo19g0587 1555 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1375 1387 IPR008271 GO:0004672|GO:0006468
Amo19g0587 1555 Gene3D Phosphorylase Kinase; domain 1 1222 1329 - -
Amo19g0587 1555 ProSiteProfiles Protein kinase domain profile. 1254 1511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g0587 1555 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 22 764 - -
Amo19g0587 1555 CDD PAN_AP_plant 342 425 - -
Amo19g0587 1555 ProSiteProfiles PAN/Apple domain profile. 344 426 IPR003609 -
Amo19g0587 1555 ProSiteProfiles PAN/Apple domain profile. 1101 1183 IPR003609 -
Amo19g0587 1555 SMART serkin_6 1254 1503 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g0587 1555 SMART serkin_6 496 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g0587 1555 Pfam S-locus glycoprotein domain 214 323 IPR000858 GO:0048544
Amo19g0587 1555 Pfam S-locus glycoprotein domain 968 1077 IPR000858 GO:0048544
Amo19g0587 1555 CDD B_lectin 32 155 IPR001480 -
Amo19g0587 1555 SUPERFAMILY Protein kinase-like (PK-like) 1240 1516 IPR011009 -
Amo19g0587 1555 CDD B_lectin 788 910 IPR001480 -
Amo19g0587 1555 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Amo19g0587 1555 ProSitePatterns Protein kinases ATP-binding region signature. 1260 1282 IPR017441 GO:0005524
Amo19g0587 1555 Gene3D - 21 152 IPR036426 -
Amo19g0587 1555 Gene3D - 776 907 IPR036426 -
Amo19g0587 1555 SMART ntp_6 345 424 IPR003609 -
Amo19g0587 1555 SMART ntp_6 1102 1181 IPR003609 -
Amo19g0587 1555 Pfam PAN-like domain 1101 1167 IPR003609 -
Amo19g0587 1555 Pfam PAN-like domain 347 410 IPR003609 -
Amo19g0587 1555 CDD STKc_IRAK 1260 1507 - -
Amo19g0587 1555 CDD PAN_AP_plant 1097 1182 - -
Amo19g0587 1555 Pfam Protein tyrosine and serine/threonine kinase 1257 1502 IPR001245 GO:0004672|GO:0006468
Amo19g0587 1555 Pfam Protein tyrosine and serine/threonine kinase 500 761 IPR001245 GO:0004672|GO:0006468
Amo19g0587 1555 ProSiteProfiles Protein kinase domain profile. 496 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0587 Amo-Chr19 9078725 9087400 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0587 483 764 Receptor kinase-like Gene Family AT4G05200 58.947 2.08e-114 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo19g0587 PK_Tyr_Ser-Thr 2.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0587 - - aip:107614884 3009.94