Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0580 ATGGGGTTGAAGCTGATTCTGCTGCTGATTAAGCTACATTTAGTGCTCAGCACTCAACAGCTTCATGAATATGAAGCCACCAATCCACACCATTCAAGAGCAAGTACTCAGTTTAGTATTGCAATCCCACCATTGAAATCAACTTCTGGAGTTTCCAAAAGCACTGCACATGCTCCTTCAAAATCATCTTCCAGTATTCCTGAAAGTATTGCAATGCCACCTTCTAAGCCAATTCAAAGAACTCATGGAAGGAAATGGACACATAGTTCTATGGATTCTCCAATATCACATTATAAGCATCACTATTCGAGAAAAAGGTCCGGCAACCTGACCCCTGCGCCGGCCTATCCAATCCATCCTCCTGCTTACAGCTATCAAGGTCCTTCAGTCTCCAAGTTGCAGCCTCCATTCTCTTCACCAAAGAACAAGGATTTTCGCGCACCTGCACCTTCACTGGCACCATCACCAGCGATTATGTCAAGCCACCTTAACGTGCCCTCTCATTCACCTAGAATTGCACCTCTGAGTTCATCATTGAAGAAGACTAAGGCACAGCCACCAGCTGCATATTCTTTTGTTCTGCCACCTCCACCTCCTAATAAGGATTGTTTGTCCATGACTTGCTCTGATCCCTTGACATACACGCCACCCGGTTCGCCTTGTGGTTGTGTATTGCCTCTTCAAGTAAAACTCCAAATCGGCATTGCAATATCCAAGTTTTTCCCTTTGGTTTCAAAGCTTGCTGAGGAAGTTGCAGCCGGTCTTTCGCTGAATCGCAGCCAAGTTCGCATTGTAGGAGCTGATGCTGCTAATCTACAACTAGAGAAAACCAATGTTCTCATAAACTTGGTACCAACAGGAGTAAAATTCAATGACACCACTGCTTTCTCCATATATCAGAAACTCTGGCACAAGAAGGTTCTTAGGCATGCTTCACTCTTTGGTGCTTATGAAGTTCTCTATGTCCAATACCCAGGTCTTCCACCATCGCCACCTTCCGCGTCCAATGGTATAGACAATGGGCCATATATCAGTGGTGATAACAATGGAACAATAATGAAACCTTTAGGAGTAGATGTCTCAAGGAAGACAAAAGGAGAGAGTAATAATGGAAGAATGATTGTTGTAATTGTATTGTCATCAGTTACTGCTTTTGTTATATTCATTGGACTTGCTTGGCTTTGTTTGTTGAAGTACAGATCCTGTGTCATCAAACCGGAACAAGGTCCAGATGTTTTGATTTCACCCTCTTCAAAACTATCTGGTACTCCTACAGAATTAGCTCATGGGAAAATGCAAAGTTCAGGATCAATGTCCTTCAATTCAGGGTCAATAACATACACAGGAGCTGCTAAGATATTTTCATTGAATGAGTTAGAGAAAGCAACAAATAACTTTGATTCTTCAAGAATATTAGGAGAAGGTGGCTTTGGTCTTGTATACAAGGGAATTCTAAATGATGGGAGGGATGTAGCAGTGAAGATCCTTAAAAGAGACGATCAGCGTGGTGGTCGCGAGTTCTTGGCAGAAGTTGAGATGCTTAGCCGGCTGCACCATAGAAATTTAGTTACATTGTTAGGTATCTGCATAGAGAGAAAGACCCGGTGCCTAGTCTATGAACTAGTCCCTAATGGGAGTGTGGAATCTCACCTGCATGGTGCTGACAAGGAAACTAGTCCACTAGATTGGAATTCGAGAATGAAGATTGCGCTTGGTGCAGCTAGGGGATTGGCTTATCTTCATGAGGATTCAAATCCATGTGTCATACACAGGGATTTCAAGTCCAGCAACATCTTGTTAGAAGATGACTTTACACCAAAAGTTTCGGATTTTGGATTGGCTAGAACGGCATTAGAGGAGGGAAACAAGCATATCTCCACCCATGTTATGGGAACATTTGGATACTTGGCTCCTGAATATGCAATGACAGGCCACCTTCTTGTAAAGAGTGATGTATACAGCTATGGAGTAGTACTACTTGAGCTCCTAACAGGAAGAAAGCCTGTGGATTTTTCACAACCACCAGGCCAAGAAAACCTTGTTACTTGGGCTCGTCCGCTTCTAACAAGTAAGGAGGGCTTAGAGATGATCATAGATCCTGTTGTAAAGCCTAGCATTCCTGCTGACACAATGTTAAAAGTCGCAGCGATTGCATCCATGTGTGTGCAGCCAGAAGTGTCTCAAAGACCATTCATGGGAGAAGTAGTTCAAGCCTTGAAGCTAGTATGCAATGAATTTGAGGAAACAAGTGATGTCAGATCAAGGAGTTTTCAAGAAGGAAGTCTCCTAACTGACATGGAAGTGAAATTGTCCGGTGTTTCGGACGAGGGGGAAGACTTTTCTGGGTATCATACCCCGGTGTATGGCTACCAATCCGGCGAGGAAAAGGTAGCATTATCAGCAACAGATTTGCTCAGTACTTCAGGCCAAGAATTTGAGTCTTTCAGGAGGCATTCTTCTTCAGGGCCTTTGACTAGTGGAAGGAAAATAAAGTTCTGGCAAAAGTTGAGAAGCATGTCCAGAGGAAGCACCAGTGAGCATGGATTTTCAACTAAACTAAGGCCTGGATCCCATTAA 2577 0.4342 MGLKLILLLIKLHLVLSTQQLHEYEATNPHHSRASTQFSIAIPPLKSTSGVSKSTAHAPSKSSSSIPESIAMPPSKPIQRTHGRKWTHSSMDSPISHYKHHYSRKRSGNLTPAPAYPIHPPAYSYQGPSVSKLQPPFSSPKNKDFRAPAPSLAPSPAIMSSHLNVPSHSPRIAPLSSSLKKTKAQPPAAYSFVLPPPPPNKDCLSMTCSDPLTYTPPGSPCGCVLPLQVKLQIGIAISKFFPLVSKLAEEVAAGLSLNRSQVRIVGADAANLQLEKTNVLINLVPTGVKFNDTTAFSIYQKLWHKKVLRHASLFGAYEVLYVQYPGLPPSPPSASNGIDNGPYISGDNNGTIMKPLGVDVSRKTKGESNNGRMIVVIVLSSVTAFVIFIGLAWLCLLKYRSCVIKPEQGPDVLISPSSKLSGTPTELAHGKMQSSGSMSFNSGSITYTGAAKIFSLNELEKATNNFDSSRILGEGGFGLVYKGILNDGRDVAVKILKRDDQRGGREFLAEVEMLSRLHHRNLVTLLGICIERKTRCLVYELVPNGSVESHLHGADKETSPLDWNSRMKIALGAARGLAYLHEDSNPCVIHRDFKSSNILLEDDFTPKVSDFGLARTALEEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDFSQPPGQENLVTWARPLLTSKEGLEMIIDPVVKPSIPADTMLKVAAIASMCVQPEVSQRPFMGEVVQALKLVCNEFEETSDVRSRSFQEGSLLTDMEVKLSGVSDEGEDFSGYHTPVYGYQSGEEKVALSATDLLSTSGQEFESFRRHSSSGPLTSGRKIKFWQKLRSMSRGSTSEHGFSTKLRPGSH* 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0580 858 ProSitePatterns Protein kinases ATP-binding region signature. 472 494 IPR017441 GO:0005524
Amo19g0580 858 Gene3D Phosphorylase Kinase; domain 1 439 541 - -
Amo19g0580 858 PANTHER OS01G0750732 PROTEIN 7 857 - -
Amo19g0580 858 MobiDBLite consensus disorder prediction 838 858 - -
Amo19g0580 858 ProSitePatterns Serine/Threonine protein kinases active-site signature. 588 600 IPR008271 GO:0004672|GO:0006468
Amo19g0580 858 MobiDBLite consensus disorder prediction 48 95 - -
Amo19g0580 858 Pfam Protein tyrosine and serine/threonine kinase 469 739 IPR001245 GO:0004672|GO:0006468
Amo19g0580 858 CDD STKc_IRAK 472 740 - -
Amo19g0580 858 MobiDBLite consensus disorder prediction 48 70 - -
Amo19g0580 858 SUPERFAMILY Protein kinase-like (PK-like) 445 739 IPR011009 -
Amo19g0580 858 PANTHER OS01G0750732 PROTEIN 7 857 - -
Amo19g0580 858 Gene3D Transferase(Phosphotransferase) domain 1 542 761 - -
Amo19g0580 858 MobiDBLite consensus disorder prediction 127 161 - -
Amo19g0580 858 MobiDBLite consensus disorder prediction 838 852 - -
Amo19g0580 858 ProSiteProfiles Protein kinase domain profile. 466 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0580 Amo-Chr19 8990872 8995642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0580 200 858 Receptor kinase-like Gene Family AT5G56890 58.333 0.0 746
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Amo19g0580 PK_Tyr_Ser-Thr 6.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0580 - - gmx:100814040 1225.31