Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0577 ATGGCACTTTCCCTTGCTTCTTCTTCTTCTTCCTCACCTCTTACTACTCGATATGATGTTTTTATCAGTTTCAGAGGCGAGGACACGCGTAACGGTTTTACCAGCCATCTTCATTCTGCTCTCCTCAGAAATCGGATCGAGACGTTCATAGATTACAGAATCCCGAAAGGAGGTGTCGTCTGGAACGAACTTGTTGAAGCCATCAGAGACTCAAAGTTGTTTGTTGTCATCTTCTCCGAAAACTATGCTTCGTCTAGCTGGTGCTTGAGAGAGCTGGTTGAGATCATGAAGTGCAAGAAAAAGAATGAACAAGTTATTGTGATTCCAGTGTTCTATAAAATAGAGCCCACACGTGTTCGCAAGCAGAGTGGAAGTTACCGCAGAGCCTTTGATGAGCATGAGAGATCCTCCAACCGTAAACATGTGCAGCAATGGAGGACGGCACTCACTGAAGCTTCGGATCTCTCTGGCTTCACTTGCAATCACCACAGGCAAGAAGCTGAGTTGATCGATGAGATTGTGAAAGCAATTTTTCCAAATCTGAATAGCAATTGCTATAGAGATGAACTCAAAAGCCCTTTTATTTGTAACAGAAACTATACTTCTGTTAAATCCTTATTGAAATTCAAGTCAGAGAAAGTTCTTGTGATTGGAATTTGGGGTATGGCCGGTATTGGCAAGACAACTATTGCTACTACTCTTCTTCATGAGTGCTCCTCAGAATACGAAAGTCATTGCTTCTTAGCCTTTTCAAAAAATTTAGAACGAAAAGGTCTTAATCACATATGCGCTAAACTTCTTTCTAGATTGTTAAATGAAGATCTTCGTATCGATAATATTCGAGTAATACACTCTAGTATTATCCGTAAAATCAAGCATAAGAAGGTTTTTGTTGTGCTAGATGATGTGACTAATTCACAAATTGCAGTTGATTTAATTCAACTCTTTCGTAACTGCCTGAGTTCTGGTAGTAAAATTATTTTGACAACAAAGGATAGAAATGTACTTACAAGTGGAGGAGTTGAAGAAATTCATGAAGTGAAGGAAATGAATTTTGAGGACTCTCTTAAACTTTTTAGCCATAATGCCTTTTGTGATTCTCATCCTAAAGAGGATTATTATGAGCTATCAACAAGAGTCGTAGCAGATTATGCCAAAGGAATACCATTAGCATTAAATATTTTGGGATCATTTCTTCGGACCAGAGGAAAAAGTGAATGGGATAGTGCATTGAGAAAATTACGAAGGTATCCCAATCCAGATATTCAGCAAGTGTTGAGATTGAGTTATGATGCATTAGATGATGATGAGAAAAACATCCTTTTAGATATTGCATGCTTTTTCCACGATCATGAGATGAAGAAAATAACAAGAATATTAAAGTCTTGTGGTTTCTATGCAGACATAGGGATAAAAAGTCTGTTGGACAAGTCTCTTGTAAGTATTTATTCAAATGGTCGTGATGAATGCATAAAAATGCATAGTTTGATACAGGAAATGTGTCGGAAAATCATTCATGAAGAATCTAGCAAAAATGGTGGTCGACAAATAAGACTGTGGAATACCGAAGAAGTCTGCAATATTTTTCAAAATGAAAGAGATATTTATGGAGTTGAAAGCATGATTGTGGATATGAATGAAATTACAATAGATCCACGTATAATCATCATTGCATTAAGAAAGATGCCAAAGTTAAGGTTACTTGCTTTAAGAGGAAATATCAACATGGATCTTGAAGGGAACAGAGTGTTTCTACAGGATTTTCAACTTCCTAATGACTTAAGGTATATTGAGTGGAATAAATGCCCACTTAACTTTGTGCGGTCGATTCCTTGGCCTCAAAAACTTGTTCAGCTTTCTATGCCAGATAGCAATGTTCAAAAACTTTGGGATACACCACAGAATCTACCAAGTTTGGAGATTATTGACCTCCGTGGCTGCAAACGCTTGATAGAGTGCCCAAATTTAGCAGGTGCCACGAATCTCAAATTAATATCACTCTATGGCTGTGAAAGCTTACAAGATGTTCATCCATCTATTTTCTCTCTCCCCAAGATTCAAAATCTATATGTGAACTTTTGCACATCCCTCAAGAGGCTTTGCAGTGGTTATTGTTCTCCCTCTCTCTGTACCTTGTGGGCCATTGGTTGCTGCAATTTGGAAGAGTTCTCAATCCCGATCATGAGTGATCATTCCAACCTCACGTTAATTTTACCAGCAACGGCTTTGACTGAAGTGCCATCCACTATTATGCATCTCAAAAATCTTGAGTGGTTCGGTTTTAACATCAGTTACTCTCTTCAGAAACTTCCTCTAAACTTTGCCTCCAAAATTTCGCTTAAGGATCCAATAAAACATGAAGATGACACATGCATCATGTTAAGTAGAATATTGCCCACCCCTGCCTTCTTGTCTCTCAAGCAATTATCTTTCTTCGAATGCAAGAGCTTGTCTAAACTCCCAGACAACATTCATGTCTTACAATCATTACAACTATTACATCTGCAAAGTTGTCATGTCATTACAAGTTTGCCAAAAAGCATTAAGAATCTTCAACAGCTCATGGGACTTGTGATCATGGATTGTAAAATGCTTCAATACGTACCTCCACTTCCCCCATCTATTATATACTTTAATGCACTAAACTGCAAATCTTTGGAGACACTCTCAAGTTTAACCAGTGAACCACCCAGAGAAGACCATGCATGGTTTGAATTCCATAACTGCACAAAGTTGGCTGATGATGCATATGAAGCAGTTTTGAAAGACTTGAAATCCAGGATAGAACTTGTGGCAAATAATGATGGATATCCGCATAATGAAGCAAGACACTTCTACTACTATTTACCAAGTAAAGAGAGCATAATTAATGAGTGGTTCCCTGACTACTACTCTAGAGAAGCTTCGATCATTGTTGAAGTTGCTCCAGATCACAAGATTTCTTCTTGTCTTGTTGGCTGCATCTTGATTTCTCAATACCAATCTTGCAACCTTACGAAGAAAAATGTGATATTTGGATGGGAATGCTACTTGGGAAAGGGTTGCAACGAGTGGGAATTGATCGCAACTTCTGCCGATGGAGTATCCTTGCACGGTTATTTTGTCGAAGGGATTCAATTGGAAATGGTATCAGATCATAAGGTAGTATGGTATGATGGAGAGGGTTCCAACAAGATAACGGAAGCAATCAAAGAGAGAAAGAGGGACACGGCTTGCAATCCTATCCTTAAATTTGAGTTCTATGCAAATACAGAAGATAATGAGAAAATAGTGATAAAGGGGTGTGGGATCCGTTGGATGCATGTCCATGTCAATGATGATGGAGAGATTAGTCCAGATGCCACTCATGAGGGATATGAATCTCATGACTCAGAGTTGGAGGACCTTGAGAGTGAGACTGTCAGAGAACGGAAAATCGGAAAAAGAGTGCATTTACATTGTGATTCCAAAGATTACTGTGATGGAGAACAGAGACAGAAAAAAAGATATAAAAAAAGAATACTCCAAGAATAG 3513 0.3843 MALSLASSSSSSPLTTRYDVFISFRGEDTRNGFTSHLHSALLRNRIETFIDYRIPKGGVVWNELVEAIRDSKLFVVIFSENYASSSWCLRELVEIMKCKKKNEQVIVIPVFYKIEPTRVRKQSGSYRRAFDEHERSSNRKHVQQWRTALTEASDLSGFTCNHHRQEAELIDEIVKAIFPNLNSNCYRDELKSPFICNRNYTSVKSLLKFKSEKVLVIGIWGMAGIGKTTIATTLLHECSSEYESHCFLAFSKNLERKGLNHICAKLLSRLLNEDLRIDNIRVIHSSIIRKIKHKKVFVVLDDVTNSQIAVDLIQLFRNCLSSGSKIILTTKDRNVLTSGGVEEIHEVKEMNFEDSLKLFSHNAFCDSHPKEDYYELSTRVVADYAKGIPLALNILGSFLRTRGKSEWDSALRKLRRYPNPDIQQVLRLSYDALDDDEKNILLDIACFFHDHEMKKITRILKSCGFYADIGIKSLLDKSLVSIYSNGRDECIKMHSLIQEMCRKIIHEESSKNGGRQIRLWNTEEVCNIFQNERDIYGVESMIVDMNEITIDPRIIIIALRKMPKLRLLALRGNINMDLEGNRVFLQDFQLPNDLRYIEWNKCPLNFVRSIPWPQKLVQLSMPDSNVQKLWDTPQNLPSLEIIDLRGCKRLIECPNLAGATNLKLISLYGCESLQDVHPSIFSLPKIQNLYVNFCTSLKRLCSGYCSPSLCTLWAIGCCNLEEFSIPIMSDHSNLTLILPATALTEVPSTIMHLKNLEWFGFNISYSLQKLPLNFASKISLKDPIKHEDDTCIMLSRILPTPAFLSLKQLSFFECKSLSKLPDNIHVLQSLQLLHLQSCHVITSLPKSIKNLQQLMGLVIMDCKMLQYVPPLPPSIIYFNALNCKSLETLSSLTSEPPREDHAWFEFHNCTKLADDAYEAVLKDLKSRIELVANNDGYPHNEARHFYYYLPSKESIINEWFPDYYSREASIIVEVAPDHKISSCLVGCILISQYQSCNLTKKNVIFGWECYLGKGCNEWELIATSADGVSLHGYFVEGIQLEMVSDHKVVWYDGEGSNKITEAIKERKRDTACNPILKFEFYANTEDNEKIVIKGCGIRWMHVHVNDDGEISPDATHEGYESHDSELEDLESETVRERKIGKRVHLHCDSKDYCDGEQRQKKRYKKRILQE* 1171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0577 1170 PRINTS Disease resistance protein signature 216 231 - -
Amo19g0577 1170 PRINTS Disease resistance protein signature 290 304 - -
Amo19g0577 1170 PRINTS Disease resistance protein signature 385 399 - -
Amo19g0577 1170 PRINTS Disease resistance protein signature 634 650 - -
Amo19g0577 1170 Gene3D Ribonuclease Inhibitor 476 783 IPR032675 -
Amo19g0577 1170 Gene3D - 15 187 IPR035897 -
Amo19g0577 1170 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 202 444 IPR027417 -
Amo19g0577 1170 SUPERFAMILY L domain-like 492 890 - -
Amo19g0577 1170 Pfam TIR domain 18 184 IPR000157 GO:0007165
Amo19g0577 1170 Gene3D - 188 342 IPR027417 -
Amo19g0577 1170 Gene3D Ribonuclease Inhibitor 788 912 IPR032675 -
Amo19g0577 1170 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 1020 IPR044974 GO:0006952
Amo19g0577 1170 SMART till_3 17 155 IPR000157 GO:0007165
Amo19g0577 1170 MobiDBLite consensus disorder prediction 1110 1132 - -
Amo19g0577 1170 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 13 1020 - -
Amo19g0577 1170 Pfam NB-ARC domain 204 420 IPR002182 GO:0043531
Amo19g0577 1170 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 158 IPR035897 -
Amo19g0577 1170 ProSiteProfiles TIR domain profile. 16 181 IPR000157 GO:0007165
Amo19g0577 1170 Gene3D - 350 434 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0577 Amo-Chr19 8924638 8935871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0577 18 863 WRKY Transcription Factor Family AT4G12020 29.837 1.55e-79 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0577 - - aip:107614877 1889.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0577 19 8924638 8935871 Amo09g0516 09 6613543 6624529 hybridization