Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0574 ATGCAAGTGCAGCCACCGTTTGTCCTCTTCTCCCCTGCGTCGCACCGCACGTTCTGGACGAAGACTTGCCCACCCTGTCGCGCCATCACAGCTTCCTCCCCACGCGCCGCAGCAACCACTGACCATGCAAGTGAAGCCATCATTCGCCCTCTTCTTCCTTGCGTGGCACTGCGCAAGAGGGAGGAGGAATGGGCCTTGAAGAAAAAGGAGGAACTTAATGCTGCAAAGAAGAAGAGAGCTGAGAGCCGCAAGCTCATTTACAGCAGGGCAAAGCAATATGCAAAGGAATACCAGGAGCAGGAAAAGGAACTGATCCTAATTATATTCTAA 330 0.5303 MQVQPPFVLFSPASHRTFWTKTCPPCRAITASSPRAAATTDHASEAIIRPLLPCVALRKREEEWALKKKEELNAAKKKRAESRKLIYSRAKQYAKEYQEQEKELILIIF* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0574 109 Pfam Ribosomal L30 N-terminal domain 58 105 IPR012988 -
Amo19g0574 109 PANTHER 60S RIBOSOMAL PROTEIN L7 58 106 IPR039699 -
Amo19g0574 109 PANTHER 60S RIBOSOMAL PROTEIN L7 58 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0574 Amo-Chr19 8884195 8884715 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0574 44 105 Cytoplasmic Ribosomal Protein Gene Family AT3G13580 64.062 1.85e-18 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0574 K02937 - gmx:100305682 53.9138