Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0571 ATGGCCTTTTCTGATGTTTATTCTCCTCCTACACCTCCACCTCTCACGAAGTACGATGTTTTTATCAGCTTCAACGGTAAAGACACTCGTAACGGCTTCACCAGCCACCTTCATTCCGCTCTGTGCAGAAACCAGATCGAAACATTCATAGATTATAGAATTGAGAAAGGTGGTGAGATCTGGGAAGAACTGGTGCAAGCCATAAGAGACTCGTCGGTGTATCTGGTCATCTTCTCAGAGCACTATGCGTCTTCAAAGTGGTGCTTGCGGGAGCTTGCTGAGATAATAGAACTCACAAACATGGTGGAAAAGGGACACCACCATATTATTCCTGTGTTCTACAGGATTGAACCCACGCATGTTCGGAAGCAGACGGGAAGCTACTACAGTGTGTTCGCAGATTATGACAGAAATTTGGATTATCGCCTTGTGCGGCAGTGGAGGAAGGCACTCTTCCATGCAGCCAATATCTCCGGCTTCGAATATAATCATCACCATAGCAGGACTGAATCTGACCTCATTGAAGGCATAGTCCAAATGATTATCCGAAAATTGGATCAGAAATACACAAATGAACTCAGGAGCCCTTTTATACATGATCAAAATTATGCTTGCATTGAATCTGTATTGATCAACTCACAGGAGGTTCGAACCATTGGAATTTGGGGCATGGGCGGCATAGGAAAAACAACTATTGCAGCTGCTATTTTTCAAGAGTTCTCTCCCAAATATGAGGGTAGTTGTTTCTTGGCCAATGTAAGAGAAGAATCTTCAAGGCATGGCCTCAACTACATTTTCAATAGACTTCTTTCTGAGTTGCTGCACGAACATGTTCATATTACCACTCCAAAGATTGTGTCTGCTGCTATACTCCGCAGATTGAGGCGTAAGAAAGTTTTCATTGTACTGGATGATGTGAATACTTCTGAGCTTCTAGAAAATTTGCTTGGAGTGGGACAAGATTATCTTGGASTTGGTAGCAAAGTTATTGTTACGACCCGAGATAAGCATGTTCTTCTGAGTAGATCAGTGGATCACATCCATGAAGTCACAGAAATGAATGAGGAGAACTCTCTCAAACTCTTTAGCTTGAATGCCTTCAACAAAATCCATCCTCCTGAAAATGGTGGATATTGGGATCTATCAAAAAGGGCACTTGCTTATGCCAGAGGAAATCCCTTAGCTTTGAAAGTTTTGGGATCATTTCTTCATTCCAAAACTGAAAAGGAATGGGACAATGCATTGACAAAACTAAAGAGGATTCCTAATGCAGATATTCAGAAGGTGTTGAGGTTGAGAGAAGAGAAAGAAAAAGTGATAAGAATATTGAATGAGTGTGGCTTCTTTGCAGATATTGGAATAAGAAACCTTTTAGACAAGGCTCTTATATCAATAGCTACCAATAAAAACATACAAATGCATGACTTGATACAGGAAATGGGTCACAAAATTGTGTGCGAAGAATCTCTCAAGAATCCTGGAAAGCGTAGTAGAGTGTGGCACCGAGATGAAATTTGCGACATATTAAAAAATGATGAAGGGTCCGCTACAATTGAAACCATATATTTGGATATGACTGAGCGGACAGAAATATGTATAAGCTCTGATGCACTTAGAAAGATGCCAAAGCTAAGCCTAAGCAGCAACAATTGTTCAACATCCCTTGAAAGAGTTGTTGCCTACAACTGCCCAAATCTGGAAGAATTCTCAATCCCAATTTCAAAAGACCATTCTGATATTCATGTCCATTTGAGGTCAACTGCCTTGAAACAACTACCATCATCAATTGTGCATCTTCAACATCTTGTGAACTTCTCCTTTCCAATCAGCGATCTCCTCATGGATCTTCCTGAAAAGTACACCAATCAAATCATGCTTTCAGACCCTAACAACCAAGAATGTGACTCAGTGGCCACCTTACGCAGAATACTACCCAGCCCTATGTTCCATTATCTAAAAGAATTGAAGTTTGATGGATGTCAAAGTTTAACTGAACTCCCAGACACAATCTCTTTGTTATCGTCATTGTTGTTGATAAGCCTACATAACACTAACATCACTTCCTTTCCAGAAAACATTAAGACTCTTCCGCGGCTCAAGGTTGTTATACTTTGTCATTGTGAAAGGTTACAACATGTACCAGCGCTTCCACCTTCCGTTCATGACTTCAAGGTCTGGGACTGCAAATCTTTGAGGACAGTGTCAGGTTCCAATACAGAAGAACTGAAAATACAGCATGGTACTACTTTTATATTCCTAAACTGCGTGATGTTGGATGAAGAGTCATACAATACCATTTTGAAAGATGCCATTGCTAGGATGGAAATCAAGGCAAAATCACTATCAGCAACAAGAACAGAAAACAGAATTGAAGAATGCACTGTTGTTGATGATGGTGATGGCTTTCTTAGTGAGGATAACGCCAACGTTGGCAAGATTTGTTATTTCTTGCCAATTAGAGGAAGTAAACTTGATGACTTGTTCCATAATGGATCTTCACAAAATTCCATCAGCATTCAACTGCCACTAAGTTCCAATTTCTCTGGTTTCATTTTCTACTTGGCTCTTCCTCCAATACCACCATGTAATACTGGTGACCTTGACATTAGGTTTGGGTTTGAATGTTACTTGGAAACAAGTTGGGGTCAAAGGACCCATATAGCAAGTTCGTCCTTAATAGGATGGGGCTGCAGTTTTTACCATGGCTTTCAGATGAATGTTATGTCGGATCATGTGTTATTATGGTATGATTCCCAATGCTGTAAGCAGATAATGAAAATAATCAGAGGAAGAAAGGCCATTGATGATGATGACAATAATGCAAATCTGGAAGTTAAGTTCTTTGCTCGGCTACCAAATAAGGAGGAAGTGGTGATAAAAGAGTGTGGCATCCGTTGGATATACACAAATATGGAGAAGGAATCAAGAGTGTGCAGGTTCAAGAGAAGCAGGCAAGTTTTCGAGTTAGAAGAAAAAGACTTGGAATCTGATGATGAAGGAGAAGAACTAGTTCCTCCAGCAAAGAAATTTAAGCATAGCTTAATGGAAGTTGAATCAGTAGAAAACTTGAGGAAAAAACTAGAACAACTTTTGCACATTCAATTTGATGGAGGCTTTCTTAGCGCGGAGATCAAACTGGGGTACAATGTGTAG 3153 0.4022 MAFSDVYSPPTPPPLTKYDVFISFNGKDTRNGFTSHLHSALCRNQIETFIDYRIEKGGEIWEELVQAIRDSSVYLVIFSEHYASSKWCLRELAEIIELTNMVEKGHHHIIPVFYRIEPTHVRKQTGSYYSVFADYDRNLDYRLVRQWRKALFHAANISGFEYNHHHSRTESDLIEGIVQMIIRKLDQKYTNELRSPFIHDQNYACIESVLINSQEVRTIGIWGMGGIGKTTIAAAIFQEFSPKYEGSCFLANVREESSRHGLNYIFNRLLSELLHEHVHITTPKIVSAAILRRLRRKKVFIVLDDVNTSELLENLLGVGQDYLGXGSKVIVTTRDKHVLLSRSVDHIHEVTEMNEENSLKLFSLNAFNKIHPPENGGYWDLSKRALAYARGNPLALKVLGSFLHSKTEKEWDNALTKLKRIPNADIQKVLRLREEKEKVIRILNECGFFADIGIRNLLDKALISIATNKNIQMHDLIQEMGHKIVCEESLKNPGKRSRVWHRDEICDILKNDEGSATIETIYLDMTERTEICISSDALRKMPKLSLSSNNCSTSLERVVAYNCPNLEEFSIPISKDHSDIHVHLRSTALKQLPSSIVHLQHLVNFSFPISDLLMDLPEKYTNQIMLSDPNNQECDSVATLRRILPSPMFHYLKELKFDGCQSLTELPDTISLLSSLLLISLHNTNITSFPENIKTLPRLKVVILCHCERLQHVPALPPSVHDFKVWDCKSLRTVSGSNTEELKIQHGTTFIFLNCVMLDEESYNTILKDAIARMEIKAKSLSATRTENRIEECTVVDDGDGFLSEDNANVGKICYFLPIRGSKLDDLFHNGSSQNSISIQLPLSSNFSGFIFYLALPPIPPCNTGDLDIRFGFECYLETSWGQRTHIASSSLIGWGCSFYHGFQMNVMSDHVLLWYDSQCCKQIMKIIRGRKAIDDDDNNANLEVKFFARLPNKEEVVIKECGIRWIYTNMEKESRVCRFKRSRQVFELEEKDLESDDEGEELVPPAKKFKHSLMEVESVENLRKKLEQLLHIQFDGGFLSAEIKLGYNV* 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0571 1050 Gene3D - 183 348 IPR027417 -
Amo19g0571 1050 ProSiteProfiles TIR domain profile. 16 185 IPR000157 GO:0007165
Amo19g0571 1050 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 209 432 IPR027417 -
Amo19g0571 1050 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 712 IPR044974 GO:0006952
Amo19g0571 1050 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 160 IPR035897 -
Amo19g0571 1050 SMART AAA_5 215 352 IPR003593 -
Amo19g0571 1050 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 12 712 - -
Amo19g0571 1050 Pfam NB-ARC domain 207 443 IPR002182 GO:0043531
Amo19g0571 1050 Pfam TIR domain 17 191 IPR000157 GO:0007165
Amo19g0571 1050 Gene3D - 15 182 IPR035897 -
Amo19g0571 1050 SMART till_3 17 157 IPR000157 GO:0007165
Amo19g0571 1050 Gene3D Ribonuclease Inhibitor 501 747 IPR032675 -
Amo19g0571 1050 SUPERFAMILY L domain-like 472 746 - -
Amo19g0571 1050 Gene3D - 352 435 IPR042197 -
Amo19g0571 1050 PRINTS Disease resistance protein signature 218 233 - -
Amo19g0571 1050 PRINTS Disease resistance protein signature 293 307 - -
Amo19g0571 1050 PRINTS Disease resistance protein signature 694 710 - -
Amo19g0571 1050 PRINTS Disease resistance protein signature 389 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0571 Amo-Chr19 8818677 8825144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0571 18 723 WRKY Transcription Factor Family AT4G12020 27.717 7.45e-59 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0571 - - ahf:112708790 1048.5