Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0552 ATGAAGACGGAGGTGAGTTTCTTGTGCAGCTATGGTGGCCAGATCAAGTTCCACGATCGAAACAACCAATACTGGTACGAAGGAGGCAATAACAAGAAACTACACGTCCGCAGCAGCATCAATTTCAATGACATGATCGCCAAGCTCTCCGCCATCAGTGGCACCGCTGACGTGGCCTACTTCAAGTACCAGATCCCAGGGTACGGCCTAGAAACCCTCCTCAGCATCACCAACGACAGAGACCTCCGCAACCTGATGCGGGACTTCGATCCAAACACACCCAACGACGTCAAGCATATCTTCCTCTTCTCCGAGGAAAATTCTTCACCCTCTCCTCCTCCTCAGCAAGTCGCTGAGAACGCATCCGAGCTGGAAGCAGGTGCCGGTCCGCGTGTGGTTCACTGCTTGATGCTTACATCGGCCGGTTTACTCTTCACAGCGGTACTACTTTTTTGGTGCCCTTCGTATTCACCCTTCAACAGCAAATCCATTCGGTTATGGTCATTAACGACGGTCTCAAGAGTACTGGAACTATCGCGGTTAATGATGATCAATCTGTCTCTGACAAAACTGTAA 576 0.5052 MKTEVSFLCSYGGQIKFHDRNNQYWYEGGNNKKLHVRSSINFNDMIAKLSAISGTADVAYFKYQIPGYGLETLLSITNDRDLRNLMRDFDPNTPNDVKHIFLFSEENSSPSPPPQQVAENASELEAGAGPRVVHCLMLTSAGLLFTAVLLFWCPSYSPFNSKSIRLWSLTTVSRVLELSRLMMINLSLTKL* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0552 191 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P 4 107 - -
Amo19g0552 191 SUPERFAMILY CAD & PB1 domains 22 110 - -
Amo19g0552 191 PANTHER OS05G0427100 PROTEIN-RELATED 4 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0552 Amo-Chr19 8291965 8292540 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0552 7 125 MAP Kinase Kinase Kinase AT2G35050 31.148 6.16e-13 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0552 - - aip:107614943 285.804