Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0533 ATGCATGCTGCGGAGCTAGGGCTTCCGACGGCCAAAACAGAGAAGCATATATTGTGCTTGAGGAAGAGAAAGCAAGCAGCGATCTTCAGAGAGCGCATAGAGTGTGGTAAGAGCGATCTTCAGAAAGCGTGTAGAGCGCGCTGCCTTCTAATTTGGTACGGCGAATTAGGTAAGGTCACTTCTCTCTGGGAGTTTATTTTTTATCCGTTCAAGTTCAACCTTTGGTTGTCATCAAGGGTGTTGGGTTGCTATTCTGGAATTTGGAAATTAAGTAAAATTATCCAGTTCTATGCTGTGGCTAGGTTTGGGGCATTGAAATTAAAACGTTATACTGGGGTCGTAAACAATTGGGTTAGTTTAGTTGGGTTTGGTTCGGGTAATTTTACATGCAGCTTAGAAGATGATGTTGAAGACGATTATGTGGATTCGCTGGATTCTACTAGCAAGAGTGAACAAGATTGTGGTGTAAAAAGAATAGCAGATTTAATGGTGGACGATATTTGGAACCTGGAGTTTAGGATAGAGGATGAGGCTTGCCAATTTTATAACGCTTATGCTTGTTGGCATGGATTTGTAATGAGGAAGGACGACGTAGTTAGGGATAATCAAGTTATAATCATTAGCAGGCAACTTGTTTGCAATAAGGAGGGCTGGAAGAATATGAGGTATCTTGATTTGGATGATAGATCAAGGGAGGTAAGGTCACTAACGCGAACCAAGTGTCCAGCTCGGCTTAGGGTAAAGCTTGACTACGGCTGCGGTAGATGGAAGGTATCATGGTTTGTGGAATCTCACAACCACGATCTGACGGCCCCCAATTTGCGCATCTGGTTCCGGCCAATCGTCGTCTCACTATTACTGATAAAGTCCAAGTAG 876 0.4349 MHAAELGLPTAKTEKHILCLRKRKQAAIFRERIECGKSDLQKACRARCLLIWYGELGKVTSLWEFIFYPFKFNLWLSSRVLGCYSGIWKLSKIIQFYAVARFGALKLKRYTGVVNNWVSLVGFGSGNFTCSLEDDVEDDYVDSLDSTSKSEQDCGVKRIADLMVDDIWNLEFRIEDEACQFYNAYACWHGFVMRKDDVVRDNQVIIISRQLVCNKEGWKNMRYLDLDDRSREVRSLTRTKCPARLRVKLDYGCGRWKVSWFVESHNHDLTAPNLRIWFRPIVVSLLLIKSK* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0533 291 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 149 271 - -
Amo19g0533 291 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 149 271 - -
Amo19g0533 291 Pfam FAR1 DNA-binding domain 180 270 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0533 Amo-Chr19 8023149 8026915 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo19g0533 FAR1 1.4e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0533 - - aip:107614789 266.159