Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0527 ATGTCGTCGTCTTCCTGTACAACAAAGTACGATGTATTCATTAGCTTCAGAGGTGAGGACACCCGCGAAACTTTCACTGTCCATCTGTTTAACGCTCTGGCAAACAAGACAATCCGAGCATACATGGATTGTCTTCTCCAGAGAGGAGATGAAGTCTGGCCAGCACTCGAGAAAGCGATCGAGGGCTCGCTAATATCGATCGTGGTTTTCTCAGAAAACTACGCAACCTCAAAGTGGTGCTTGGAAGAGCTCGTCAAGATTCTTCAATGGAGGGAATATCACGGTCAGGTTGTTATACCCGTTTTCTATAGAACAGATCCGTCAGATATACGGAACCAAAGTGGGAGTTTTGAGAAGGCGTTTGCTAAATACGAAAGAGATCTTGCAGAGAGTGAATCCAACAGAGACAAGATAAGCAAGTGGAGAGAGGCTCTCAAGAAATCTGCTAATATTTCTGGATGGCACTCCAGAAACTATGCGGACGATCATGAACTCATCAGAAAGGTTGTGAATGATGTATTGAAAATGCGTATCCTAAAGCATCCCATAGTGCCAACAGGCCTGGTTGGAATTGAAGAAATCCGTAARATTGTTAAAGTCAACATGAAGCAACACCGAGTAATTGGAATYTGGGGTATGCGTGGGATAGGGAAGACAACCATCGCTAAAATGTTATTTGCAAAATCCTTTCCTCATTATGACCATGTTTGCTATGCGGAAAATGCAAAAGAATATACGCCTCAAAGGCTTCTCTCAGAGCTATTGAGGGAACGAATTACCACTGACGCAACAGGGTTTGTCAACAGTATGAGCAGCCTTAGCAATAAGAAAGTTCTCATTATCCTCGACAATGTGAAGGATTCTGATCAACCATTGTTAGAAGCAGTTTGCCAAGGGTACAAGAGCCACAGTCGAGAAAGTAAACTTATTATAACAACAACACATAAGCATTTGCTTGAAAAGAGAGTTGATTGGACATTTGAGGTCAAACAATGGGACGACTCAAAATCTATAGAGCTTCTTAGCCTGAAAGCATTCGAGGAAAGCATCCCTCCAAAGCCTTATGAGATTCTGGTGAATAAGGTTGTTAAGTATGCCGGGGGAATTCCTTTAGCTCTGAACCTATTGGGTTCATATCTTCAATCCAGAAGCATTGAGTTCTGGGAAAGTACTTTGGAAAAGCTCCAGAAGCATCCTATTAAGCGCATTCAGGCTGCCTTTACGGAGAGTTATGATGAATTGGATGACTTAGACAAGGAGATATTTCTTGACATTGCATTCTTTTTCCATGGAGAAAAGAAAGATCTTGTCACAAGCATATTAAAAGCATGTGAATTCTCACCCATAAGGGGAATAGAGATCCTTCAAGATAAAGCAATGATTACTACTATTCCATATAAGGAAACAATCGAAATGCATGGCTTGCTAAGAGAAATGGCTTACGAGATCGTACACGAGGAAAACAGTAAAGACCCTAGAAAACGTAGCCGATTGAAGGATACTGAAGATATTTGTGTTGTACTCAAAGAGAACAAGAAATCGCTTGATGCAATTGAAGGCATAATATTAGATTTGTCTCAAATTAAAGACTTGCGTTTGAGTCCTGACACATTTAAAAGGATGAATAACTTGAGATTTCTAAAATTATACATCCCCTCGGGTCAGAGTTCTGGTAATATGATCCTTCCTACAGACCTTGAACCATTTTCTGATAAACTAAGGTACTTTGAGTGGCATCAGTACCCTTTCGTTTCTCTTCCACCAAGTTTTTATGCTAAGTTACTTGTTGAGATTCGCATGCCGCACAGCCAAGTCAAGAAACTCTGGGAGGAAAAGCAGGAACTTAATAATTTAGAAGGGATCGACTTAAGTGAATGCAAAGAGTTAGAAGAGCTTCCAGATTTGTCTGAGGCTAAAAGACTCAGATGGGTGAATCTCTCCGGTTGTGAGACTTTGCCTATTCTTCATTCGTCTGTTTTTTCCTCCAACACACTTGTTTCTTTGATACTGGATAGGTGTACAAATTTGCAGTGTGTTAAGGCCGAAAGGCATTTGAATTCTCTGCAGCACATAAGTGTCAAAGGCTGCTCAAATCTCAAAGAATTTGTGGTATCGTCAGATTTAATTGAAAACTTGGATTTGAGCAACACAAAGGTTGAAAAGCTGGACAAATCAATCGGGAAATTACAGAAGGTTGAATGCCTCAATCTAGAAGGATCAAGAGTTAAGCATCTTCCAAAGGAGCTATCAGCCTTAAAATCGCTTAAGGAGTTGAAGCATTCATACAGTGGACTAGAAATTGACAAGCATCAGCTGCAAGGCCTGTTTAACGGTTTATCATCTCTACAAATACTACATTTGAAGGATTGTAGTCACTTGTTTGAATTCCCTGACAACATTGATTCCTTATCGAAATTGCGCGAGTTAAGGCTAGACGGAAGCAATGTGACCTGGTTGCCTGCAACCATCAAGGGTCTTCAAGAGTTGGAAATTTTGTCCCTAAATAATTGTAAGTTTCTTGAGACACTGCCAGAGCTTCCATCCTCTATCAAGGAGTTCTCTGCTGATAACTGCATCTCATTGGAGTCTGTATCAGCTCTAAACACTCTGGCAACAAAGATGGTGGGAAAGACGAAACGCATCTCCTTTAATAATAGCTTGAAATTGTCAGCCGGACACACATTGCATTCGATCATGGAAAGCATCCATTCAACAATGGTGAGTGCTGTATCTAGCAATGTCACGGTAAGAAGCTATGCAATTGATGTCCATAGCTACAACTACAATAGTGTGGAGGTCTGTTTGCCAGGAGACACAATCCCAGAGCAATTTGCATATAAAACGGAGAAATCCTCCTCCATAACAATTGAACTCCCTGAATCTCCTTCCAATTTTCTTGGCTTTATCTATTCAGTGGTTCTTTCACCGCGTCATGGAATGGAGAAGCACGGTGCCAAAATCCGATGCGAATACAACTTTGCAGGAGGCAAGAATTCTTCGTGGGAGGACATAACTATAAGTGAATTGAACTCAGATCATGTATATATATGGTATGATCCATTCCTCACTGACAAAATTCTTGGACAATATGGGCCAAGTTTTCATCTTGAGTTCAGTGTTGCAACTGACACAGGGGAAGTTGATGACTCAATTATTATTAAAGAGTGTGGTGTCCACATCATAAATGAATTAGAATTGCAGAGATTTTTACTGGAATTAGATAAGAAGAAAAAAGACATGGAGGAGGAATCATCAGCGCAGCATTTACACTTTCATCCACCACATGGATCTCAAGATCACAGCCATGTCCGGACTCCACCTCAAGACAAGAAGAAAGGAAGATTTTATGAGAAGCAGAGCAATGACATCGAAAACCAGATATCAAAGCGAAAAAGAGAAATGAATGAACAATCATCTTTTGATCGGAAAATTGAAGAGAAGATGGAATCCGCTCCCAATGAAAACAAGACTAGTGGTGGAAAAAGTGATGAGGAGAACACAATCAAGGGCAAAGGAAACGAAGAAACACCAACTGAACCTGATGCTGCATTACCTCTATGTATTGATTCAGTTAAAAACAATGTGTTCCAGGACATTTCAAATGAAAATTATTATGATCAGCCAGATAGTATGGAAGAGGCCAAACATTTGGAAGAAAAACTACAAGAAGTTGATCATAACGTCCATGATATGACTGCTGATGAACCATACAAAGAAAAGCAAGGGGAACCAATGGATCTTGAAACATCTGAATGTCAAGACCACACTAGCAATGTAGAACAAACAGAAAATCTTGGGGATGCTAAGAAAGTGCAAGAGCTACACAAAGAGAAAATGATTGAGCTTGCTCAGCCCATTAATTCCTGCATACCTCCACACGGCAAGAAGAGAGCTCCTAAGTTGACTGTGAAAGAACTCCGCCGTCACTCGAGGAAGGTAGACAAGAAGGCAAAAGTTGAAGGTAACCCTGCAAGAGCAACTCAAGCTACAAATTTAGCCATGGAAACTTCTGATTTTTCCCGTTCGAATATTAAAGGCAAAAGAGTAGATCATATCCATTTAAACCAGGTTCCAGCTCAAAATGCTTCTACTTCTATTGCACAAACTCATGATAAAATTACCATTCCCTCCTTGGATGATCCTCAAGTTGCTCTGGAGTTGCTAAAACACTTCGATGCATCAGCGAAACGCCTCCAAATAACAGAGTTTGTGGACAATCATGTTCTATATCCATATGATCATTCCATAACAAAAGACCTTGATGTTTCGGCACTTTGTCGTTGGCTTCAAGTTCAAGGGCTTCGTTCAGTGAGCGTTGCGAGATACGCAGAGATGAAGTTGGAAGCGGCCAAACGGGAAAGAGAGGAAGAATTAAGACTTGCAAGAGAAGAAAATGCAAAGTTTGAAGAAGCTTTGAAAAGAATGGAGGACAGGATTTCACATGTTGAATCGTTGGAGAAAAGAGTTGATGATTTGAATTCGGAGGTGGCTTCTTGGAGAAGTAAATATGAAGAAACTGAAAAGTCGCTCAAAGAAACCGAAAAGAAACTTGAAGATGAGAAAGATGTAGGAGCTCAGAAAGAAACTCGTTGGAAAAGAAGAGAGAGTGAGCTGATTACGGAAGCGGCAACTTGCTCGTTTGAAAATTGCAGATCGCAGGTTTCCATTTTATACCCTGACATTGATTTAAGTAGGCTTGGACCTTTCAAGGAGATTCAGAATGGGCAGATAGTATCGCCCTCTGATACGGAGGAGACTGAAAGTGAAGAAGACACTAGGGCCTTTGAAGATGCTGCTCATGGCGATGCCGGTGTCTAG 4818 0.4078 MSSSSCTTKYDVFISFRGEDTRETFTVHLFNALANKTIRAYMDCLLQRGDEVWPALEKAIEGSLISIVVFSENYATSKWCLEELVKILQWREYHGQVVIPVFYRTDPSDIRNQSGSFEKAFAKYERDLAESESNRDKISKWREALKKSANISGWHSRNYADDHELIRKVVNDVLKMRILKHPIVPTGLVGIEEIRKIVKVNMKQHRVIGIWGMRGIGKTTIAKMLFAKSFPHYDHVCYAENAKEYTPQRLLSELLRERITTDATGFVNSMSSLSNKKVLIILDNVKDSDQPLLEAVCQGYKSHSRESKLIITTTHKHLLEKRVDWTFEVKQWDDSKSIELLSLKAFEESIPPKPYEILVNKVVKYAGGIPLALNLLGSYLQSRSIEFWESTLEKLQKHPIKRIQAAFTESYDELDDLDKEIFLDIAFFFHGEKKDLVTSILKACEFSPIRGIEILQDKAMITTIPYKETIEMHGLLREMAYEIVHEENSKDPRKRSRLKDTEDICVVLKENKKSLDAIEGIILDLSQIKDLRLSPDTFKRMNNLRFLKLYIPSGQSSGNMILPTDLEPFSDKLRYFEWHQYPFVSLPPSFYAKLLVEIRMPHSQVKKLWEEKQELNNLEGIDLSECKELEELPDLSEAKRLRWVNLSGCETLPILHSSVFSSNTLVSLILDRCTNLQCVKAERHLNSLQHISVKGCSNLKEFVVSSDLIENLDLSNTKVEKLDKSIGKLQKVECLNLEGSRVKHLPKELSALKSLKELKHSYSGLEIDKHQLQGLFNGLSSLQILHLKDCSHLFEFPDNIDSLSKLRELRLDGSNVTWLPATIKGLQELEILSLNNCKFLETLPELPSSIKEFSADNCISLESVSALNTLATKMVGKTKRISFNNSLKLSAGHTLHSIMESIHSTMVSAVSSNVTVRSYAIDVHSYNYNSVEVCLPGDTIPEQFAYKTEKSSSITIELPESPSNFLGFIYSVVLSPRHGMEKHGAKIRCEYNFAGGKNSSWEDITISELNSDHVYIWYDPFLTDKILGQYGPSFHLEFSVATDTGEVDDSIIIKECGVHIINELELQRFLLELDKKKKDMEEESSAQHLHFHPPHGSQDHSHVRTPPQDKKKGRFYEKQSNDIENQISKRKREMNEQSSFDRKIEEKMESAPNENKTSGGKSDEENTIKGKGNEETPTEPDAALPLCIDSVKNNVFQDISNENYYDQPDSMEEAKHLEEKLQEVDHNVHDMTADEPYKEKQGEPMDLETSECQDHTSNVEQTENLGDAKKVQELHKEKMIELAQPINSCIPPHGKKRAPKLTVKELRRHSRKVDKKAKVEGNPARATQATNLAMETSDFSRSNIKGKRVDHIHLNQVPAQNASTSIAQTHDKITIPSLDDPQVALELLKHFDASAKRLQITEFVDNHVLYPYDHSITKDLDVSALCRWLQVQGLRSVSVARYAEMKLEAAKREREEELRLAREENAKFEEALKRMEDRISHVESLEKRVDDLNSEVASWRSKYEETEKSLKETEKKLEDEKDVGAQKETRWKRRESELITEAATCSFENCRSQVSILYPDIDLSRLGPFKEIQNGQIVSPSDTEETESEEDTRAFEDAAHGDAGV* 1606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0527 1605 Pfam TIR domain 9 175 IPR000157 GO:0007165
Amo19g0527 1605 PRINTS Disease resistance protein signature 207 222 - -
Amo19g0527 1605 PRINTS Disease resistance protein signature 272 286 - -
Amo19g0527 1605 PRINTS Disease resistance protein signature 366 380 - -
Amo19g0527 1605 PRINTS Disease resistance protein signature 613 629 - -
Amo19g0527 1605 SUPERFAMILY L domain-like 523 866 - -
Amo19g0527 1605 MobiDBLite consensus disorder prediction 1569 1605 - -
Amo19g0527 1605 MobiDBLite consensus disorder prediction 1508 1529 - -
Amo19g0527 1605 Gene3D - 6 176 IPR035897 -
Amo19g0527 1605 Gene3D Ribonuclease Inhibitor 476 707 IPR032675 -
Amo19g0527 1605 Gene3D Ribonuclease Inhibitor 708 916 IPR032675 -
Amo19g0527 1605 Coils Coil 1444 1530 - -
Amo19g0527 1605 Gene3D - 177 324 IPR027417 -
Amo19g0527 1605 MobiDBLite consensus disorder prediction 1081 1176 - -
Amo19g0527 1605 Gene3D - 332 415 IPR042197 -
Amo19g0527 1605 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 425 IPR027417 -
Amo19g0527 1605 Pfam NB-ARC domain 197 415 IPR002182 GO:0043531
Amo19g0527 1605 Pfam Leucine Rich Repeat 595 613 IPR011713 -
Amo19g0527 1605 PANTHER NB-ARC DOMAIN PROTEIN 8 945 - -
Amo19g0527 1605 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 945 IPR044974 GO:0006952
Amo19g0527 1605 SMART till_3 9 151 IPR000157 GO:0007165
Amo19g0527 1605 ProSiteProfiles TIR domain profile. 8 177 IPR000157 GO:0007165
Amo19g0527 1605 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 154 IPR035897 -
Amo19g0527 1605 Coils Coil 1214 1234 - -
Amo19g0527 1605 MobiDBLite consensus disorder prediction 1081 1181 - -
Amo19g0527 1605 Pfam C-JID domain 935 1065 IPR045344 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0527 Amo-Chr19 7903859 7914198 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0527 5 832 WRKY Transcription Factor Family AT4G12020 30.129 1.64e-83 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0527 - - aip:110266592 3115.86