Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0522 ATGTCTTGCTCAACCAAGAAATATGATGTTTTTCTTAGCTTCAGAGGCGAGGACACACGCACAAACTTCACTAGCCATCTTTACACTGCTCTTGATCAAAAGTCAATCAGAACTTACATAGATTATCAACTCAACAGAGGAGAAGATGTTTGGCCACCACTCGCCAAAGCGATCGAGAACTCGCATGTATCGGTTGTGGTTTTCTCAGAGAACTATGCTTCTTCAAAATGGTGCTTGGAAGAACTTGTCAAGATTCTCCAATGCAGAAAGGATTTTGGCCAGGTTGTTATTCCAGTGTTCTATGAAACAGATCCATCACATATAAGAAAACAAAGTGGGAGTTATGGGAAGGCATTTGCAAAACATGAGCTTGATCTTTGGGTAGAGGGCAGATACAGTGATTCCAACAAACACAAAGTAGACAATTGGAAAGCTGCTCTCACTGAAGCTGCCAATATTTCTGGGTGGGACTCTCGGAACCACAATTTATACTTCCTTACATCTCTTTTCCCCATCATTTTTGCAAGGGACGATTCTCAACTGATTGCAAACGTGGTTAATGATGTACTGCAAAAGCGTTACTTGAGGCACCCTATTGAACTAAAAGGCCTTGTTGGAACTGAAGAAATCTGCAGAAATGTCGAATTGTTAATGAAAAGAGTTCGAATAATTGGAATTTGGGGCATGGGTGGAATAGGTAAGACAACCATTGCCAAAGTGTTGTTTGCCAAACTGTTTCCTCAGTATGACAATGTGTGCTTTGTGGTGAAAGAAATCTCAGTTGATAGGCTTCTGTTCGAGCTGTTAAAGGAAGAAACTTCCACATCTAACTTGGTAGGACTCGCATTCGACATGAAGAGGCTTAATAACAAAAAGGTCCTCATTGTGCTAGATGATGTGGATAGTCTTGATCAATTGGAACATTTGTGTAGAGATTTTCGAGATCTAAGTGAAGATAGTCGACTCATCATAACTACAAGAAATAGGCAATTGCTTGCTGGAAGAGTTGATTGGATATATAAGGTTGAGAAATGGAAAGCATCTGAATCTCTACAGCTTTTTAGCCTGGAAGCCTTCAAGGAAACTCATCCTCAAAGGGGTTATGAAGATCTCGCCGCAATGGCGGTTAAGTATGCTGGAGGCATTCCCTTAGCTTTGAAAGTTTTGGGTTCGTATCTTCGTTCGAAAAGTATCAAATTTTGGGAAAGTACTTTGAGAAAACTCAACAAGTATCCCAATGAGACGATTGTAAATTTGTTGAAGGTAAGCTATGATGGATTGGATGATCTAGAGAAGAAGATATTCTTGGACATTGCATTTTTTTTCAATGGAGAAGAGAAAGATCATGTCATAAGCATACTAGATGCATGTGGATTTGAAGCAAGTAGTGGAATAGATGTTCTTGAAGATAAAGCTTTGATAACCATTTCATATAACAACACAATAGAAATGCATGAACTGCTACAAAAAATGGGTTTTGACATAGTGCGTAGAGAATGTAGTGGAGACTTTGCAAGACGAAGTCGATTGAGGGATACTGAAGTTCGTGCTGTACTTAAAGATAATAAGGGGACTGATGCAGTTGAAGGCATAATATTAGATTTATCTCTAATCAAAGATATTCATTTGAGTGTTGACACATTCAAAAAGATGAATAACATGAGATTTCTAAGATTCTATATCCCCTTGGGTCAGAGTCCTGGCCATGTGTACCTTCCAAGAGCTCTTAAGTCATTTTCCAATAAACTGAGGTACTTTGAGTGGAATGGATATCCTTTGGAGTCTCTTCCTTCAACTTTTCATGCTAAGTTGCTCGTTGAAATTCGCATGCCGCACAGTCGTGTCGAACAACTTTGGAGGGGAAAACAGGAACTTGATAATTTAGAGGGCATTGACCTAAGTGATTGCAAACATTTGATAATGCTTCCGGATTTGTCGAAGGCGTCAAGACTTAAATGGGTGAATCTATCAGGTTGTGAGAGTTTGTGTGCTCTTCATTCATCTATTTTGTCCTCTGATACACTTGCCACTTTGATACTAGATAGGTGTACAAATCTGGGGACTGTGAAAGGTGAAAAGCATTTAAAATCTCTGAAGAATATTAGTGTCAGTGGGTGCTCAAGTCTCAAGGAATTTGCAGTGTCATCTGATTTAATTGAGAACTTGGATTTAAGCAACACAGAAATTGAGACGCTAGACACATCAATTGGGAATCTACCTAATCTTATATGGCTCAATTTAGAAGGTTTGAAGCTTAAGCAACTTCAAAAGGAGTTATGTTTCTTGACATCACTAAAGGAGTTAAAGCTTTCTTACAGTGGACTAGTAATTGACAAGCAGCAACTGCATGTGCTGTTTGATGGCTTGAGATCTCTACAGATACTCCATCTGAAGGATTGTGCTAATTTGTTTGAATTTCCCGACAACATTGGCACTTTATTGAAACTACAAGAGTTAAAGCTAGATGGAAGCAGTGTGAGGAGTTTGCCTACAAGCATCAAACATCTTTTAGTGCTCGAGATTCTGTCATTAAAGAATTGCAGGGAGCTTCTGAGCCTACCGGAGCTTCCGTCTTTCATCAAGGAATTCTATGCCCCTAACTGCACCTCATTGGAGACAGTATCAAAATTCAAAAGCTTTGCGATGAAGATGGTGGGAAAGACAAAACACATTTCATTCAAGAATAGCATGAAACTGAATGGAAACTCACTGTATTCTATCATGGAAAGCTTGCATTTAACAATGTTAAGTGCTGCATTTCACAATGTGTTGGTAAGAAGATTCCATGTGGCCATCCATAGTTATAATTATAACTGTGTGGATGCCTGTTTACCAGGAAGCAGAGTCCCCGAGCAATTCACATTTCGAATAACAAACTCTTCCTCCATTACCGTTCATCTTCCTACCTGTTCCAACTTGCTGGGCTTCATCTACTGTGTGGTTCTCTCACCATCCAATGGAATGAAGCAGTGCGGTGCAAAAATACAGTGTGAATGCAATTTGGCAGGAGGCCTAAAGGCTACATGGCAAGATAAAGCAGTTAGTGAGCTGAACTCGGATCATGTTTATTTATTGTATGATCCATTCCATTGTGACAACATTCTCAGATTTTATGAACCAAAGGTCTATTTTGAGTTCAGTGTAACAGCTGACACAGGGGAAGTTGATGGATCTATAGCTATTCAAGAGTGTGGTGTACACCTCATAAGTGATTCAGAATTGCAGTGTGTTTTATCAGAACTGGAAATGGATTTAGACAAGAGGAAGGACTTGGAGAAGGAATTGGAGATAGAATCTGGAAAGGCCAGATGGTTATATACACATGCCTCCGAAGATCACAGCAAAAATCTGGTCACCCCTCCCCCTCCTCCTCCTCCCTCAACCCCTCCACTCCCAAAACCAAAAACTAGAAAGAAAGTAAGGTCACACAAGGAGAAAAGTAGCAGTAAGAGAAACCGGATGCAGAATCCAGGAACGGAATTATGCGTGCAATGTTGCTGCGATAGGAAAGTAGCCACAGAAGAAATGAAGTCTGAGATTGTTGAAATAGATCCTAGGAGTACAGACCATTTTTCTGATGTAGAAGAGAGAATGGAATCTAATTGCAAGAAAATCAAGAATGGTGATAGAAAAGGTCTTGAGGAAAATAACTCAAAGTCAACAAAAGCTGTCAAAAGCAAAGGAAATGAAGGCAGGCCAATTGATTTTGATGCTGGATTGGATCTGCTTGTTAATTCAGATTCAGCCAGTGAAGAATATGCGCCTGAAGACATGCCACTTCAAAACTTTTATGATCAACCAAATACCATAGAAGGATCTAATCACTATAAAGAAAATCCAATGCTACTAAAAAGACAACTCCTGGTTCATCCTGACATTAATGATCTGACCGTTGAAAAACCAAACCAGGAAAGAAAAAAGGAAAGAATGGGTCTCGACAAACCTAAAGTGGAAGGTGAGTCGGATGAAGATCCTCTTGCTGAACTTGAGAGCATCTTGCTGGGAAGACAGAAGTCGTTGCTGAAACCAGCCTGTTCTGCAAGCGATGTTGCCATAAGGGAAGCTCTGCATAATCTTGAATGCATACTCGAAAAGTCACTTGAAAACATTCTTGGTGACATTGAATTACAACACAAGTTACAAATTTCTTTGCAATGCATAGAAGAGGCATCAGATGAAGAAGTTTCTCCCAGTATAACAAAGCTTGTCAAAAGCATGACATCTTCTGTTGAGGATCTGATCAAAAGTTTTGCGTGGACCCAAAAAGTAGTTGAAGACCACACTAGCCGCTTGGAACAAAAAGAAAAACTTGTGCAGAAAATGTTAGATGCTAGGAAACAGCAAGAATTAGTGAAAGAAAGAATGAAACAATACAAGATTCAAGCAGAAAGTGTTGAGAGAGAGGTTGAAGATCTTGACGAACAAATTCGATTTCTTGTTGAACAAAGAAAAATCATCCAAATGAAAAGGACCAAGTTGAATAAGGACTTGGAAGAATGCGATGGCAAAAGGAGGAAACTAACAGATGAGGCTAAGGATTGGGTAACTGAAAGCAAGGAGCTAATGTTGACAATTAACAATTCTGAAGTCTCATATGCAAGTGCAATATCTAAGCAAGAGAAGTTGAATGAGAAATGGGAAGGTTTTCGAGAATCTTTTTCACAAAAGAAGTTAAAACCTTATCCTAGAATAATGTTGTAG 4701 0.3937 MSCSTKKYDVFLSFRGEDTRTNFTSHLYTALDQKSIRTYIDYQLNRGEDVWPPLAKAIENSHVSVVVFSENYASSKWCLEELVKILQCRKDFGQVVIPVFYETDPSHIRKQSGSYGKAFAKHELDLWVEGRYSDSNKHKVDNWKAALTEAANISGWDSRNHNLYFLTSLFPIIFARDDSQLIANVVNDVLQKRYLRHPIELKGLVGTEEICRNVELLMKRVRIIGIWGMGGIGKTTIAKVLFAKLFPQYDNVCFVVKEISVDRLLFELLKEETSTSNLVGLAFDMKRLNNKKVLIVLDDVDSLDQLEHLCRDFRDLSEDSRLIITTRNRQLLAGRVDWIYKVEKWKASESLQLFSLEAFKETHPQRGYEDLAAMAVKYAGGIPLALKVLGSYLRSKSIKFWESTLRKLNKYPNETIVNLLKVSYDGLDDLEKKIFLDIAFFFNGEEKDHVISILDACGFEASSGIDVLEDKALITISYNNTIEMHELLQKMGFDIVRRECSGDFARRSRLRDTEVRAVLKDNKGTDAVEGIILDLSLIKDIHLSVDTFKKMNNMRFLRFYIPLGQSPGHVYLPRALKSFSNKLRYFEWNGYPLESLPSTFHAKLLVEIRMPHSRVEQLWRGKQELDNLEGIDLSDCKHLIMLPDLSKASRLKWVNLSGCESLCALHSSILSSDTLATLILDRCTNLGTVKGEKHLKSLKNISVSGCSSLKEFAVSSDLIENLDLSNTEIETLDTSIGNLPNLIWLNLEGLKLKQLQKELCFLTSLKELKLSYSGLVIDKQQLHVLFDGLRSLQILHLKDCANLFEFPDNIGTLLKLQELKLDGSSVRSLPTSIKHLLVLEILSLKNCRELLSLPELPSFIKEFYAPNCTSLETVSKFKSFAMKMVGKTKHISFKNSMKLNGNSLYSIMESLHLTMLSAAFHNVLVRRFHVAIHSYNYNCVDACLPGSRVPEQFTFRITNSSSITVHLPTCSNLLGFIYCVVLSPSNGMKQCGAKIQCECNLAGGLKATWQDKAVSELNSDHVYLLYDPFHCDNILRFYEPKVYFEFSVTADTGEVDGSIAIQECGVHLISDSELQCVLSELEMDLDKRKDLEKELEIESGKARWLYTHASEDHSKNLVTPPPPPPPSTPPLPKPKTRKKVRSHKEKSSSKRNRMQNPGTELCVQCCCDRKVATEEMKSEIVEIDPRSTDHFSDVEERMESNCKKIKNGDRKGLEENNSKSTKAVKSKGNEGRPIDFDAGLDLLVNSDSASEEYAPEDMPLQNFYDQPNTIEGSNHYKENPMLLKRQLLVHPDINDLTVEKPNQERKKERMGLDKPKVEGESDEDPLAELESILLGRQKSLLKPACSASDVAIREALHNLECILEKSLENILGDIELQHKLQISLQCIEEASDEEVSPSITKLVKSMTSSVEDLIKSFAWTQKVVEDHTSRLEQKEKLVQKMLDARKQQELVKERMKQYKIQAESVEREVEDLDEQIRFLVEQRKIIQMKRTKLNKDLEECDGKRRKLTDEAKDWVTESKELMLTINNSEVSYASAISKQEKLNEKWEGFRESFSQKKLKPYPRIML* 1567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0522 1566 PRINTS Disease resistance protein signature 287 301 - -
Amo19g0522 1566 PRINTS Disease resistance protein signature 223 238 - -
Amo19g0522 1566 PRINTS Disease resistance protein signature 623 639 - -
Amo19g0522 1566 PRINTS Disease resistance protein signature 379 393 - -
Amo19g0522 1566 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 156 IPR035897 -
Amo19g0522 1566 Pfam TIR domain 7 192 IPR000157 GO:0007165
Amo19g0522 1566 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 957 IPR044974 GO:0006952
Amo19g0522 1566 MobiDBLite consensus disorder prediction 1117 1133 - -
Amo19g0522 1566 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 193 438 IPR027417 -
Amo19g0522 1566 Coils Coil 1078 1098 - -
Amo19g0522 1566 MobiDBLite consensus disorder prediction 1134 1148 - -
Amo19g0522 1566 MobiDBLite consensus disorder prediction 1205 1236 - -
Amo19g0522 1566 Gene3D - 4 192 IPR035897 -
Amo19g0522 1566 Coils Coil 1424 1444 - -
Amo19g0522 1566 Gene3D - 346 428 IPR042197 -
Amo19g0522 1566 SMART till_3 7 153 IPR000157 GO:0007165
Amo19g0522 1566 SUPERFAMILY "Winged helix" DNA-binding domain 415 500 IPR036390 -
Amo19g0522 1566 Pfam NB-ARC domain 219 414 IPR002182 GO:0043531
Amo19g0522 1566 Gene3D - 193 337 IPR027417 -
Amo19g0522 1566 MobiDBLite consensus disorder prediction 1300 1324 - -
Amo19g0522 1566 Coils Coil 1448 1510 - -
Amo19g0522 1566 Pfam C-JID domain 944 1073 IPR045344 -
Amo19g0522 1566 ProSiteProfiles TIR domain profile. 6 193 IPR000157 GO:0007165
Amo19g0522 1566 MobiDBLite consensus disorder prediction 1205 1234 - -
Amo19g0522 1566 SUPERFAMILY L domain-like 533 873 - -
Amo19g0522 1566 MobiDBLite consensus disorder prediction 1113 1155 - -
Amo19g0522 1566 PANTHER NB-ARC DOMAIN PROTEIN 6 957 - -
Amo19g0522 1566 Gene3D Ribonuclease Inhibitor 519 716 IPR032675 -
Amo19g0522 1566 Gene3D Ribonuclease Inhibitor 717 912 IPR032675 -
Amo19g0522 1566 MobiDBLite consensus disorder prediction 1300 1322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0522 Amo-Chr19 7791499 7797574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0522 789 884 WRKY Transcription Factor Family AT4G12020 31.250 1.45e-06 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0522 - - cam:101515491 1635.16